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Name : M641_12050 (M641_12050) Accession : YP_008299909.1 Strain : Listeria monocytogenes R2-502 Genome accession: NC_021838 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 2339268 - 2341037 bp Length : 1770 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAATCCAAAGGGAGACTGTTTTTGTACGTTGTTTTGGCGTTGTCGATTGTTATTGGGACGAATGTATTTATAAAAAT AGACGCACATGCAGCCGCTGCACCACCAGCTGCAATCAGCCAGATTTTTCCCGATGATGCTTTAGCGACAGAAATTCAAA CTACACTCGGAAAGTCTAGTACAGCAGAGGTTGTCACTCAAACAGATTTAGATACTATTAATTCATTAACCCTTACTTCT AAAGGTATCAGCTCCCTAGAAGGTATGAACTACTTGACCAATTTAGGAACTTTAATTTTAACTGGTAATCAAGTAAGCGA TATTTCGCCACTTAAAGGCTTAACTAACTTGACCATGCTTCAGCTGAGTGGAAATCCGATTAGCGACATTAGCGCACTTA GTAACTTGAAAAACTTACAAGCTCTAGATATTAACGACGCGCAAGTTACTGACATCACGCCACTGAGCGGTTTAACAAAT CTAAAGGGTTTAGGCTTATATAATAATCAATTGGAGAACCTTAGTGGAGTAAATAGTTTACATCAACTCCGCTCCTTAAA TGTTAGTAATAATAAGCTTACGAACCTAGATGAGCTACAAGCGCTAAGCAATTTAAGCGTTCTATATGCAAATGAAAACC AAATTAACAATCTTCAGGGGCTAAGTAATTTAAATAACCTTTTCTTGCTTGATTTATCAGCGAACCAAATTGTGGATACT ACTCCACTCGCTGGCTTAACTAAGGTACAAACATTATACGTATCAAACAATCAAATTAGTGATGTAACTGGTCTTTCGAG TTTAATAAATCTAGATTGGCTCGATATAAGCCAAAATAAAATTAGTAACATTAGACCTTTAAACAGTTTAACGAAGCTAA CAATTATTCAAATGACTAATCAATTAATCGTAAACGAACCGATAAGTTTCGAAAGCACTGTAACGATTCCTAATTTAATA AAAAACATTGCGGAACAAACGATTGATCCCGATACAATTAGCGATAACGGTGTGTATGCGAATGAAGCTGTTACATGGAA TTTACCTACTTATATTCCTAAAGTCAGCTATACCTTTATTGAACGTGATACGATTGGTAATGCAACTGGAAATTTCAGTG GGACTGTAGAACAACCATTAGTACAATATTTTAAAGCAACTTTCAATATTGACGGGCAAGAAACAACGGAAAATGTCGAA ACAGGGACACTTTTACAAGAACCACCAACCCCAGTCAAAGAGGGTTATACATTTAACGGATGGTATGATGCTGAAACAGG TGGAACAAAATGGGACTTTACAGCCGATACGATGCCAGCAAATGATATAACGTTGTATGCCCAGTTTAGTATTAATAGTT ATACCGCAACTTTTGATGTAGATGGCGTCATTTCTACTCAAGCGGTAGAGTATCAAGGTTTACTGGAAGAGCCACCAGCG CCAACTAAGGATGGTTATACATTTAAAGGTTGGTATGATGCCAAAACTGGTGGAACAAAATGGGACTTCACAAACAATCA AATGCCAGCAAATGATATAACCTTGTATGCCCAGTTTAGTAAAGATGCATCTTCTGGTGGGGACGGTGGAGGAACCGATG AAGGTGGAGGTAACTCTGAAAATAGTACAGAGGGAGCTCCTAATACGAGTGATATAGATACTATAAACCACATCGTACTA CCAGCAACAGGAGATGACCATGTGCTTTTTCCAATCTTTATTGGAACATTTCTTACGAGTTTAGCATTACTTACACTTAG AAGAAAATAA Protein sequence : MKSKGRLFLYVVLALSIVIGTNVFIKIDAHAAAAPPAAISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTS KGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTN LKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDT TPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIVNEPISFESTVTIPNLI KNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDTIGNATGNFSGTVEQPLVQYFKATFNIDGQETTENVE TGTLLQEPPTPVKEGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDASSGGDGGGTDEGGGNSENSTEGAPNTSDIDTINHIVL PATGDDHVLFPIFIGTFLTSLALLTLRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 1e-111 | 47 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 2e-110 | 44 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 2e-109 | 43 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 4e-109 | 43 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 6e-86 | 43 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 3e-86 | 43 |
