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Name : gabD (M641_09255) Accession : YP_008299358.1 Strain : Listeria monocytogenes R2-502 Genome accession: NC_021838 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 1777800 - 1779266 bp Length : 1467 bp Strand : - Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : TTGAGTATTAAAGAAACAGCCTTACCAAAAGTTCAAACAAAATTATTTATTAATGGAAAATGGACGGATGGAGATAATAA AGAAACAAAAGATATTGTAAACCCAGCAAATGGAGAAGTTATTGCCAAAATCGCTCAAGCTGGACCAAACGAAACCAAAA AAGCCATTAAAGCTGCAAAAGAAGCATTTCCTGATTGGGCAAAAATGGAACTAGCTGATCGCGTCAAATTATTACACAAA ATTGCCGATTTAATGGAAGAAAAAGCAGATACACTAGCAAAAATTATGACGCTTGAACAAGGTAAACCGCTAAAAGAATC AAAAGGAGAAGTCCTAACTGGCGCAGAAAACTTCCGATTCGCTGCAGAAGAAGCAAGAAGATTATATGGGGAAACTATCC CAGCGCCAAACAATCACGCGTTTATCGTCAAAAAACAACCAATTGGTGTAGTTGCGGCCATTACTCCGTGGAATTTCCCA GGTGGTATGGTGACACGAAAACTTGCTCCAGCGCTTGCAACCGGAAATACAATCGTATTAAAACCTTCCGGAGATACGCC GCTTTCGGCCCTAGCTATCTTTGAAATTTTTGAAGAAGCCGGCTTGCCAAAAGGTGTTGCCAATATCGTTATGGGTAGCT CCAAAGAAATCGGCGAAACATTAACTGACAGTGATGATGTTCGTAAACTAACTTTCACCGGCTCCACGAAAGTCGGTCAA ACACTATTCAAACAATCAGCCGAAACACTGAAAAAAATCTCGCTCGAACTTGGTGGACATGCGCCATTTATCGTATTTGA TGATGCAAACCTGGATGCTGCTGTAAATGATTTAGTTGCCGCAAAATTCCGCAATAACGGTCAAGTATGTGTATCGCCAA ACCGAATTTTTGTTGCCAAAGAAATTAAAGAAAAATTCACTAAGGCGCTAGTTGCTAAAGTAGAACAACTAAAAGTAGGT AACGGTTTAGATGATGTGAATGTTGGTCCACTTATCCGCGAAGATGCGATTGACAAAATCGACAAACAACTTAAAAATGC CACAGATAAAGGTGCCAAAGTCCTAACTGGCGGCGGTCGTTTAACAGGTTCCGACTATGACAATGGCAACTTCTACAAAC CAACTGTCTTAGATAACGTTACTCGTGAAATGGACATTTTTTATGAGGAAACATTTGGTCCAGTAATCCCGCTTATCACA TTTGAAACGGAAGACGAAGCAATCGAAATGGCGAATGACAGTGAATTCGGTCTTGCTTCTTACTTCTACACTAAAGATTT AGCACGCGTAGAAAAAGTGGGAGCAGCACTAGAATACGGAATGGTCGGAGCAAATGAAATTGCCATCTCTAATCCGGAAA CTCCATTTGGCGGCGTTAAACATTCTGGTTTCGGTCGCGAAAACGGCCACTACGGAATGGAAGAATACATCCAAGTGAAA TTCATTAACTTAAAATATCGTGACTAA Protein sequence : MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGEVIAKIAQAGPNETKKAIKAAKEAFPDWAKMELADRVKLLHK IADLMEEKADTLAKIMTLEQGKPLKESKGEVLTGAENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ TLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRIFVAKEIKEKFTKALVAKVEQLKVG NGLDDVNVGPLIREDAIDKIDKQLKNATDKGAKVLTGGGRLTGSDYDNGNFYKPTVLDNVTREMDIFYEETFGPVIPLIT FETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK FINLKYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-100 | 52 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-75 | 41 |
