Gene Information

Name : M639_12655 (M639_12655)
Accession : YP_008297091.1
Strain : Listeria monocytogenes J2-031
Genome accession: NC_021837
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2476654 - 2478828 bp
Length : 2175 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAACTGTGAAAAATGTAATCAAAATCCAGCAACAATCCAACTATATATGAATATTAATGGCAAGCGTGTGGAAATGCC
GCTTTGTGCCTCTTGTTATGCAGAAGTTAGAAATCAAGCAAACTTTGGGTCGAATGAGTTCCCAGGAGCAAGTGGCTCCC
CGTTTGACGATATTTTTCGTCAATTGAGTGGTGCTGCAAACCAAGCAAACCGTGAACAAAGAAGCCAAGCTAATGCACAA
GTACAAACACAAACTGCTGGCGGTGGTAATGGCATATTAGATGAATTTGGGACTAACTTAACAGATATGGCGAAAAACGA
GCAACTCGACCCTGTCATTGGCCGTGATAAAGAAATTAAGCGTGTCATTGAAATATTGAACCGCCGTAATAAAAATAATC
CAGTCCTAATCGGTGAACCAGGTGTTGGTAAAACTGCCGTCGTAGAAGGACTTGCAAATGCAATTGTCGCAGGAGACGTT
CCAAGCAAACTAATGAACAAAGAAGTTATCTTACTTGATGTCGCTTCGCTTGTTTCCGGAACAGGTATCCGCGGTCAATT
TGAAGAACGCATGAAACAACTAATTAAAGAACTTCAAGAACGTAAAAACACGATTCTCTTCATTGATGAAGTGCATACTA
TCGTTGGGGCAGGTTCCGCAGAAGGGTCAATGGATGCAGGAAACATTCTAAAGCCAGCTTTAGCTCGCGGCGATTTGCAA
ATGATTGGTGCTACTACGCTAAAAGAATACCGCACAATCGAAAAAGATGCCGCACTTGAACGACGCTTCCAACCAGTAAC
TGTAAGCGAACCATCCACAAAAGAAACGCTAACTATTTTAAATGGTTTAAAACCAAAATATGAAGATTTCCATGAAGTAG
TTTATTCACCTGAAGCATTAACAGCAGCAGTTGAATTAAGCGCTCGTTATATCCAAGATCGTCATTTGCCAGACAAAGCA
ATTGATTTAATGGATGAAGTTGGCTCAAAATATAATCTATCCATTGAAAAACTAGACGAAAATACGGTAAGCGAACGTGT
TGCCCATTTAGAAGATGAAAAAAATCAAGCTCTTCAAATGGAAGACTACGAAAAGGCAGCCAAAGTTCGTGACGAAATTA
CTCGCTTAGAAGAAAATAAAACAAGCAATTCCTTCTCAGAACGCCCTGTCATTCAAGCATCAGACATACAAGCGATTATT
GAAGAAAAAACAGGCATTCCTGTAGGACGCTTACAAGAAGACGAGCAATCCAAAATGAAAAACTTAGAACGTAACTTAAC
TGGAAAAGTAATTGGTCAAGAAGATGCCGTGAAAAAAGTAGCTAAAGCAATTCGTCGTAGCCGTGTTGGCCTCAAATCAA
AAAATCGCCCAATTGGTTCCTTCCTATTTGTTGGACCAACTGGTGTCGGAAAAACAGAACTTGGTCGTACGCTAGCTCGT
GAATTGTTCGGTACTACTGAAGCAATGATTCGTTTAGATATGAGTGAATTCATGGAAAAACACAGCGTCTCTAAACTAAT
CGGTTCTCCTCCAGGCTATGTTGGTCACGAAGAAGCTGGGCAATTAACAGAAAAAGTTCGTCGCAATCCGTATAGCATCA
TTTTGTTAGACGAAATCGAAAAAGCACATCCAGACGTTCAACATATGTTCCTACAAATTTTAGAAGATGGTCGACTAACT
GATTCACAAGGGCGTACAGTAAGCTTTAAAGATACAGTCATCATTATGACAAGTAATGCTGGTGCGACAGATACAGAGGC
TTCTGTCGGCTTTAATACAACAACAGAAACTAAACTTGAAAAAGGCTCTGACATCCTTGCGAAATTAGGCGCATACTTCA
AACCAGAATTCTTAAACCGTCTTGATAGCGTCATTGAATTTAAATCACTAGAAAAAGACGATTTAGTACAAATTATTGAT
TTAATGCTCGTTGACTTAAATGAAATGCTCGCTCAAGAAGGCGTGACAATCGATGTTTCCAAGGAAGTAAAAGAACATTT
GATTGATCTTGGTTATGATCCTAAATTTGGAGCACGGCCACTACGCCGGACTATCCAAGAGCACCTGGAAGATACTATTG
CTGACAGTTTAATTGATCAACCAGAAGCGAAAAATCTCGTTGCAACTCTAAACGATAACAAAGAAATCACCATAACAGAA
CAAGTAACAGCGTAA

Protein sequence :
MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGSNEFPGASGSPFDDIFRQLSGAANQANREQRSQANAQ
VQTQTAGGGNGILDEFGTNLTDMAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGDV
PSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQ
MIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLTILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKA
IDLMDEVGSKYNLSIEKLDENTVSERVAHLEDEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQASDIQAII
EEKTGIPVGRLQEDEQSKMKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLAR
ELFGTTEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLT
DSQGRTVSFKDTVIIMTSNAGATDTEASVGFNTTTETKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIID
LMLVDLNEMLAQEGVTIDVSKEVKEHLIDLGYDPKFGARPLRRTIQEHLEDTIADSLIDQPEAKNLVATLNDNKEITITE
QVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-156 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M639_12655 YP_008297091.1 ATP-dependent Clp protease ATP-binding protein VFG0080 Protein 0.0 99
M639_12655 YP_008297091.1 ATP-dependent Clp protease ATP-binding protein VFG0079 Protein 2e-161 52