Gene Information

Name : pyk (SDIMI_v3c01870)
Accession : YP_008292286.1
Strain : Spiroplasma diminutum CUAS-1
Genome accession: NC_021833
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 214210 - 215646 bp
Length : 1437 bp
Strand : +
Note : -

DNA sequence :
ATGAATAAATTTAACTTAACTGACAAAATGAAAAGAACCAAAGTAATTACAACTATTGGTCCAAGTGTTCATTCAAAAGA
AGCTATTAAAGAATTATTTGATAAGGGAATGACAACAATACGTTTAAATTTCTCTCATGCAGATTTTCAAGAACATGGTG
AAAGATTTGAATGAGTAAAAGAATTAAGAAAAGAAATTAATAAACCAATTTCAATTTTATTGGATACAAAAGGTCCAGAA
ATTAGAATTGGAAAAATGAAAGATGGAAAACAAGAAGTAAAAGCAGGAACTGAAATAACTGTTTATACTAATCCAGAAGA
CTTTTCATCAAGAGAATGTTCAGCAACTGAAATGCAAATGTCATATGACATGTCTCAAGATGTTAAACCTGGTGATGTTG
TTTTAGTTGATGATGGAAAATTAACAATGCATGTAATAAGCGTTGAAAAATTTAAAGTTATGTGTACAGCATTTAACACA
CACTTAGTTAAAACAAATAAAAGAGTTAACTTACCAGGTGTTGAATTTACATTACCATTCTTAGCAGAAAAAGATTACAA
TGATATTCACTTTGGAATTGAAAGTAATATTGACTATATTGCAGCATCATTTGTTAACTCAGCAGATAATGTTAATGAAA
TTAGAGCAATATTAAAAGCAAAAAATGCAGAACATATCCAAATTATTTCAAAAATTGAATCACAAGTTGGATGTGATAAT
ATTGATTCAATTATTGATGCATCAGATGGAATTATGGTTGCTCGTGGAGATCTAGGATTAGAAATTCCTTACTATGATGT
TCCATATTGAGAAAAACAAATAATTAGAAAATGTAGAGAAAAAGGAAAATTAGTTATTGTTGCAACTCAAATGTTAGAAT
CAATGACTGATAATCCTCAACCTACAAGAGCTGAAGTAACTGACGTTTACTATGCAACAGAATTAGGAGCAGATGCAACT
ATGTTAAGTGGAGAATCAGCAAATGGTGATTTCCCATTTATAACTGTAGAAACTATGTCAACAATTAATAAGCGTGCAGA
AGTTGAATTCTATGAAAAAAACTACTACACTAAACAATTAGAAAAAGCTAGAAAATCAAGTTCAGGAAAAAGAGCTGAAA
TTGCAAATCAATTAGCAAACACTACAATGGGTGGAAATTACGAATATGCAATCGTTGTTTCAAGAACTGGTGAATTATTA
AGAACTATTTCAAAATTTAGACCCAATGTTACAATCTTAGGAGTTTGTGACAATGAAAAATTATGAACAGGATTTGGTGC
AATGCACTCAATCTTTATGAGTAAAGTTGAAGATCTTGATGCATTTATGAACGATGATAAAGCAATAGCTGAGATTGCAA
AATCTTGAGGAGCTAAATCAGGTGAAAGAATTTTATTTGTAAGAAACGAAAACATTAAAGAAATTACTGTTGCTTAA

Protein sequence :
MNKFNLTDKMKRTKVITTIGPSVHSKEAIKELFDKGMTTIRLNFSHADFQEHGERFEWVKELRKEINKPISILLDTKGPE
IRIGKMKDGKQEVKAGTEITVYTNPEDFSSRECSATEMQMSYDMSQDVKPGDVVLVDDGKLTMHVISVEKFKVMCTAFNT
HLVKTNKRVNLPGVEFTLPFLAEKDYNDIHFGIESNIDYIAASFVNSADNVNEIRAILKAKNAEHIQIISKIESQVGCDN
IDSIIDASDGIMVARGDLGLEIPYYDVPYWEKQIIRKCREKGKLVIVATQMLESMTDNPQPTRAEVTDVYYATELGADAT
MLSGESANGDFPFITVETMSTINKRAEVEFYEKNYYTKQLEKARKSSSGKRAEIANQLANTTMGGNYEYAIVVSRTGELL
RTISKFRPNVTILGVCDNEKLWTGFGAMHSIFMSKVEDLDAFMNDDKAIAEIAKSWGAKSGERILFVRNENIKEITVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-69 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-69 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-69 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-69 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_008292286.1 pyruvate kinase VFG0479 Protein 6e-70 44