Gene Information

Name : pyk (SDIMI_v3c01830)
Accession : YP_008292282.1
Strain : Spiroplasma diminutum CUAS-1
Genome accession: NC_021833
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 210648 - 212102 bp
Length : 1455 bp
Strand : +
Note : -

DNA sequence :
ATGAACAAAGAAATAGAATTTTATGAACCAAGTAAGATTGCTAAAAAAGTAAAAAGAACTAAAATTGTTACAACAATAGG
ACCAAGTACTCATTCAAAAGATGACATTAGAAAATTATTTGAAGCTGGAATGAATGTTGTTAGATTAAACTTTTCACATG
GAAAACAAGAAGAGCAAGCTGAAAAAATTAAATCAGTTATTGAGTTAAGAGAAGAATTAGAAAAACCAATTTCAATTATG
CTTGATACAAAAGGACCTGAAATTAGAATTGGAAAAGTTCTAGATGGATCACAAGAAATTAAAGCAGGAACAGATATTAG
AGTTTATACAACACAAGAAGAATATTTAAATCGTGAATGTAAATCAACTGAGATGACAGTTTCTTATGATATGAGTATTG
ATTTAAAACCAGGAGATACAGTTTTAGTTGATGATGGTAAATTAACATTAAATGTTATTAATGTTGAACCAGGTTTAGTA
AATTGTAAAGCATTCAATACACATACTGTAAAAACTAATAAAAGAGTTAACTTACCTGGTGTTGACTTTTCATTACCATT
CTTAGCAGAAAAAGATATTGAAGATATTAAATTTGGTGCAAAAATGAAAGTTGATTATATTGCAGCATCATTTGTTAACT
CAGCAGATAATGTTAATGAAATTAGATCAATATTAAAAGAATGTAATGCAGAAAATGTTCAAATTATTTCAAAAATAGAA
TCAAAAATTGGTATTTTTAATATTGATTCAATTATAGAAGCATCTGATGGAATTATGGTTGCTCGTGGTGATTTAGGATT
AGAAATTCCTTATTATGAAGTTCCATATTGAGAAAAACAAATGATTAGAAAATGTAGAAAAGCAGGAAAAGTTGTAGTTG
TTGCAACTCAAATGTTAGAATCAATGACTGATAATCCTCAACCTACAAGAGCTGAAGTAACTGACGTTTATTATGCAACA
GAATTAGGAACAGATGCAACTATGTTAAGTGGTGAATCTGCTGCTGGAATTTACCCATTTATTACAACAGAAACAATGGC
AACAATTAATAAAAGAGCAGAATTAGGTTTCTATGGAAAAATTTATTATGATAGAGCTTTAGAAGTTGCAAGAAATTCAA
CTTCAGGAAAAAGAGCTGAAATTGCAGATGAATTGGCAAATATAACAAGAAATGGTAAATATGAATTTGCAATAGTTCTT
TCAAGAACTGGTGAATTATTAAAAACTATTTCAAAATTTAGACCAAACGTTACAATTTTGGGAGTTTGTGATAAAGAAGA
ATTATGAACAGGATTTGGTGCAATGCACTCAATCTTTATGAATAAAGTTAATAGCATTGATGAAGTAATTGATAATAATG
ATGTATTATCAGAAATTGCAAGATCATGAGGTGCAAAAAAGGGTGAAGAAATCTTAATTGTGAGAAATGAAGATATCAAA
TCTCACATAGTTTAA

Protein sequence :
MNKEIEFYEPSKIAKKVKRTKIVTTIGPSTHSKDDIRKLFEAGMNVVRLNFSHGKQEEQAEKIKSVIELREELEKPISIM
LDTKGPEIRIGKVLDGSQEIKAGTDIRVYTTQEEYLNRECKSTEMTVSYDMSIDLKPGDTVLVDDGKLTLNVINVEPGLV
NCKAFNTHTVKTNKRVNLPGVDFSLPFLAEKDIEDIKFGAKMKVDYIAASFVNSADNVNEIRSILKECNAENVQIISKIE
SKIGIFNIDSIIEASDGIMVARGDLGLEIPYYEVPYWEKQMIRKCRKAGKVVVVATQMLESMTDNPQPTRAEVTDVYYAT
ELGTDATMLSGESAAGIYPFITTETMATINKRAELGFYGKIYYDRALEVARNSTSGKRAEIADELANITRNGKYEFAIVL
SRTGELLKTISKFRPNVTILGVCDKEELWTGFGAMHSIFMNKVNSIDEVIDNNDVLSEIARSWGAKKGEEILIVRNEDIK
SHIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-65 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 9e-65 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 9e-65 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-64 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_008292282.1 pyruvate kinase VFG0479 Protein 4e-65 44