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Name : lysS (SDIMI_v3c00180) Accession : YP_008292117.1 Strain : Spiroplasma diminutum CUAS-1 Genome accession: NC_021833 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 20034 - 21545 bp Length : 1512 bp Strand : + Note : - DNA sequence : ATGAGCAATAATTTTGAAAGAAATTTTTCAGAACAAGAAAATATTAGAAGAGAAAAACTTAATAATCTAATTGAAAAAGG AAGAGACCCTTTTGTTGAAAATGAATTTGATAGATCACATTCACTTAATGAATTAATTGAAAAATTTGATTCATTTACAA AAGAAGAATTACAAGAAAAAACAGATATTATTGTTTCTGTTGCTGGAAGAATTAGATTATTTAGAGAAGCTGGAAAAAAA GCAATTTTTGCAAATATTCAAGATCAAAACTCTTCAATTCAAATTTATGTAAGACAAGATGAATTGGGTGAAGAGGAATT TGAATATTTTAGAAATTTAGATCTTGGTGATATTATTGGTATTCAAGGAATAATGATGAAAACTGATCATGGTGAATTGA CAATAAGAGTAAAAAATGCAAAACTTCTAACTAAAGCTTTAAAACCATTACCAGACAAGCATTTGGGAATTGCAGATATT GAAGAAAAGTATAGAAGAAGATACGTAGATTTAATTATTAATCCAGAATCAAAACAAGTTTTTATTGATAGAACGAAAAT AATTAGAACAATGCAGTCAATTTTAGATTCAAAAGGTTATATGGAAGTTGAAACTCCAATTTTACAGTCTGTTAGAGGTG GAGCAAGTGCTAAACCTTTTGTTACACATTATAATGCTTTAGACAATGAATTTGTTCTAAGAATTGCAACAGAATTACAT TTAAAAAGATGTATTGTAGGTGGATTTGATGGAGTTTATGAAATAGGTAGAATTTTTAGAAATGAAGGAATTAGTACTAG ACATAATCCAGAATTTACATCAGTTGAACTTTATGTTGCATATAAAAATATGGATTTCTTAATGGATTTATGTGAAGAAT TGTTTAGGGAATGTTCTCTTGCAGTTAGAGGAACTACAAAAATTAATTATGGTGGCCATGATTTAGATTTGGCAAAACCA TTTAAAAGATGACACATGGTAGATGCTATTAAAGAGGTTTGTGGAGTTGACTTTTGACAAGACATGACTTATATAGAAGC TTGTGAAATTGCAAAACAAAAAAATGTTAAAGTAGAAAAACATCATTTTTCTGTTGGACATATCATTAACCTATTCTTTG AAGAATTTGTAGAAGAAAAAATAATTGAACCAACTTTTATATGAGGACATCCAAAAGAAATATCTCCATTATCAAAATTG AATGCAAAAGATTCAAGATTTACAGATAGATTTGAATTGTTTATCATTAATAGAGAATATGCAAATGCATTTGCAGAACT AAACAATCCAATTGATCAATACGAAAGATTTGTTGATCAAATAAAAGAAGCTGCTGCGGGAAATGATGAAGCAAATGATA TGGATATTGATTTCATAGAAGCTTTAGAATATGGAATGCCTCCAACTGGTGGAATTGGAATTGGAATTGATAGAATGGTT ATGTTATTAACAAATTCAGAATCAATAAAAGATGTATTATTATTCCCTCAAATGAAACCAAGAGGTAACTAA Protein sequence : MSNNFERNFSEQENIRREKLNNLIEKGRDPFVENEFDRSHSLNELIEKFDSFTKEELQEKTDIIVSVAGRIRLFREAGKK AIFANIQDQNSSIQIYVRQDELGEEEFEYFRNLDLGDIIGIQGIMMKTDHGELTIRVKNAKLLTKALKPLPDKHLGIADI EEKYRRRYVDLIINPESKQVFIDRTKIIRTMQSILDSKGYMEVETPILQSVRGGASAKPFVTHYNALDNEFVLRIATELH LKRCIVGGFDGVYEIGRIFRNEGISTRHNPEFTSVELYVAYKNMDFLMDLCEELFRECSLAVRGTTKINYGGHDLDLAKP FKRWHMVDAIKEVCGVDFWQDMTYIEACEIAKQKNVKVEKHHFSVGHIINLFFEEFVEEKIIEPTFIWGHPKEISPLSKL NAKDSRFTDRFELFIINREYANAFAELNNPIDQYERFVDQIKEAAAGNDEANDMDIDFIEALEYGMPPTGGIGIGIDRMV MLLTNSESIKDVLLFPQMKPRGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-81 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008292117.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-81 | 47 |
