|
Name : LM220_18795 (LM220_18795) Accession : YP_008289297.1 Strain : Listeria monocytogenes J1-220 Genome accession: NC_021830 Putative virulence/resistance : Unknown Product : ATP-dependent helicase Function : - COG functional category : - COG ID : - EC number : - Position : 900285 - 902216 bp Length : 1932 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGACATCAAATATTTTTGAAATTAATTATAATGGTACTGGACAAAGCCAAAATACAAATGCGTTAGGAATGCGTGAGAT GCAGGCGCGTGTCTATGAAAAACGTACATCTCAATATCTATTAGTTAAAGCTCCCCCTGCATCAGGGAAATCACGCGCTT TGATGTTTGTAGCTTTGGATAAGCTCGCAAATCAAGGCATAAAAAAAGTAATTATTGCAGTTCCAGAACGTTCAATTGGA AAATCTTTTCAAACCACAGAACTAGCAAAATTCGGCTTCTTCTCTGATTGGATTATTAATCCCAAAAACAATCTCATGGA TCGTGGAACAAGTGAAAGTAAAGTGTCTCAGTTTGTTAATTTTATTCGTTCAACAAACTCAGAAGATAATATTATGGTTT GCACCCACGCGACTCTACGTTTTGCTTTTGAAAAATTGAATGATTCTGACTTTGACAATGTTTTACTTGCCATTGATGAG TTTCATCATGTATCACAAGATGATAATTCTGTTCTTGGTAATGCGATGCGTAAAATTATGGGAAATTCTTCTGCGCATAT CATTGCAATGACAGGTTCCTACTTTCGAGGTGATTCAGTACCAATTTTAGAGTCTACTGATGAGCAAAAATTTGATAAGG CAACCTATACTTATTTTGAACAACTTGAAGGTTATAAATATCTAAAGAGTTTTGCAATGGGCTATAGCTTTTATCGAGGT CGTTATACTGATGCACTTTCAGAAGTTTTGGATACCTCAAAGAAAACAATTATTCATATTCCAAATGTAAATTCCGGCGA ATCCACCAAAGATAAATATGATGAAGTTGACCGTATTCTAGAAGAATTAGGTGATGCAAAATTTGATGAAAAATCAGGGA TTTGGCTACTAACTGGAAAATATGGACGAGTATTAAAAATTGCTGATTTGGTTAATGAAGAAGGTCGTGAAAAAGTTCAA GAATATATCCGAAATATGTCTAAACTAGATGACTTGGACATTATTATTGCACTTGGTATGGCAAAAGAGGGATTTGACTG GCCTTTCGCAGAATATGCTTTAACAATTGGTTATCGTAATTCATTAACTGAAGTTGTGCAAATTATTGGGCGCGTGACTC GTGATAGTTCAAATAAAACTCATGCACAATTTACCAATTTAATTGCTCAACCAGATGCTCAAGATGATGAGGTCATGTTT GCGGTTAATAATGTCATGAAAGCAATCACTGCAAGTCTTTTGATGGAATCTGTATTAGCTCCAAACTTTAACTTTAAGCG TAAAGATAATGATGACCAAAAATCAAAAGGAACAGAAATATTCATCAAAGGTTTAAAAGAGACCAGTACTGAGCGTTCAA AAAATATTATTCAAAACGATTTGAATGACTTGAAAGCGACTATTTTACAAGACAGTCAAATTCAGCAAGCTATTGCTGCC GGTGTAAGTGCAAAAGTGATTAATAAGCAACTTGTACTGCGAGTGATAATGAATACCTATCCTGATTTGTCAAATGATGA GACTGAGGAAGTTCGTCAGCACTTAGTTGCACAAGCTGTCATTCAGTCTGCGGAACATGAAGAAGGAACAGGCGGGAATC AATTTCTTAGAATGGCGAATAAATTTATAAATATTGATGAAATTGCAATTGATTTGATTGATGAAGTAAATCCCTTCCAG CGTGCCTATGAGGTTATTTCAAAGGAAATTGATGCACCAACTTTACGCTTTATCCAAGATTATATGGATGGTATAAAATT CACTTTTTCTGAAGATGAATTAGTTATGTTGTATCCTCAAATTGTTCAATTTAAAAATGAAAATGGTAGAATTCCAGATA AGTCTAGTTCAGATCAATACGAGCAAAGATTAGCCTATGCTTTATTACGTTTGGAGCAACTAAGAAGAGAGAGACAAGAT GGACAAGCTTAA Protein sequence : MTSNIFEINYNGTGQSQNTNALGMREMQARVYEKRTSQYLLVKAPPASGKSRALMFVALDKLANQGIKKVIIAVPERSIG KSFQTTELAKFGFFSDWIINPKNNLMDRGTSESKVSQFVNFIRSTNSEDNIMVCTHATLRFAFEKLNDSDFDNVLLAIDE FHHVSQDDNSVLGNAMRKIMGNSSAHIIAMTGSYFRGDSVPILESTDEQKFDKATYTYFEQLEGYKYLKSFAMGYSFYRG RYTDALSEVLDTSKKTIIHIPNVNSGESTKDKYDEVDRILEELGDAKFDEKSGIWLLTGKYGRVLKIADLVNEEGREKVQ EYIRNMSKLDDLDIIIALGMAKEGFDWPFAEYALTIGYRNSLTEVVQIIGRVTRDSSNKTHAQFTNLIAQPDAQDDEVMF AVNNVMKAITASLLMESVLAPNFNFKRKDNDDQKSKGTEIFIKGLKETSTERSKNIIQNDLNDLKATILQDSQIQQAIAA GVSAKVINKQLVLRVIMNTYPDLSNDETEEVRQHLVAQAVIQSAEHEEGTGGNQFLRMANKFINIDEIAIDLIDEVNPFQ RAYEVISKEIDAPTLRFIQDYMDGIKFTFSEDELVMLYPQIVQFKNENGRIPDKSSSDQYEQRLAYALLRLEQLRRERQD GQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDPW8_0255 | YP_005141822.1 | putative ATP-dependent helicase | Not tested | Not named | Protein | 9e-113 | 47 |
