Gene Information

Name : LM220_04081 (LM220_04081)
Accession : YP_008289129.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 733200 - 733922 bp
Length : 723 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTCAGAAATAGCGATTAAAGTTTCTAATTTAGATGTGAAAATTGGAAAGAAACAAATCTTAACCAATATGACTCTCGA
AATAGAAAAGGGCGAGATATTTGGCTTAATAGGGCCATCCGGTGCAGGAAAAACAACACTCGTGAAAACCATCATCGGAA
TGGAAAAGGCAACGAATGGCACAACTGAGGTTTTAGGAAAAGCAATGCCAAATTTACCAGTCATTAGCAAAATTGGTTAC
ATGGCCCAATCAGACGCACTTTATACGGATTTAACAGCCAAAGAAAACTTGGATTTTTTCGCTTCACTATATTCCATCAA
AGGTGCAGCCAAAAAAGACCGAATGAATTATGCAGCCACTTTAGTTAATTTACAACAAGATTTAACTAAAAAGGTGAACA
ATTATTCAGGAGGGATGAAACGCAGGCTGTCTCTGGCCATTTCTGTCCTTGCTGACCCAGATGTCCTAATTTTAGATGAG
CCAACAGTCGGTATTGATCCAGAACTAAGAAAAACGATTTGGGCAGAGCTAGGCGATCTAAAAGCGAACGGTAAATGTAT
CCTTGTGACGACACACGTGATGGATGAAGCCGAAAAATGTGATAGACTTGCCATGATCAGAAATGGACAAATAATCGCTG
TAGGGACCCCACAAGAGCTCTCAAGTAAAACGTCATCTGGTAAGCTAGAAGATGCCTTTTTAGAGTTTGGAGGGAAGCAC
TAA

Protein sequence :
MSEIAIKVSNLDVKIGKKQILTNMTLEIEKGEIFGLIGPSGAGKTTLVKTIIGMEKATNGTTEVLGKAMPNLPVISKIGY
MAQSDALYTDLTAKENLDFFASLYSIKGAAKKDRMNYAATLVNLQQDLTKKVNNYSGGMKRRLSLAISVLADPDVLILDE
PTVGIDPELRKTIWAELGDLKANGKCILVTTHVMDEAEKCDRLAMIRNGQIIAVGTPQELSSKTSSGKLEDAFLEFGGKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 2e-58 52
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 3e-45 51
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 3e-55 51