Gene Information

Name : LM220_06567 (LM220_06567)
Accession : YP_008291379.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Virulence
Product : 1-phosphatidylinositol phosphodiesterase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2998090 - 2999043 bp
Length : 954 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
TTGTATAAGAATTATTTGCAACGCACATTAGTTTTAGTACTCTGTTTTATTTTATGCTTTTTTACTTTCCCATTAGGTGG
AAAAGCATATTCGCTTAATAACTGGAATAAGCCAATAAAGAACTCTGTAACTACAAAGCAATGGATGTCCGCTCTACCTG
ACACAACGAGCCTAGCAGCACTCTCTATACCAGGTACACATGATACGATGAGCTATAACGGAGACATGACGTGGACATTA
ACCAAACCACTGGCTCAAACACAAACGATGTCATTGTACCAACAACTAGAAGCAGGAATACGGTACATCGATATTAGAGC
AAAAGACAATCTCAAAATTTACCATGGGCCAATTTTTTTAAATGCATCACTTTCAGGTGTATTAGAAACGATTACTCAAT
TTTTAAAGAAAAATCCAAAAGAAACCATTATTATGCGTTTAAAAGACGAGCAAAACAGCAACGATAGTTTTGATTATCGG
ATCCAACCATTAATCAACATTTACAAAGATTATTTTTACACTACTCCCAGAACTGACACGAGCAATAAAATCCCTACATT
AAAAGATGTCCGCGGAAAAATATTATTACTTTCAGAGAACCACACAAAAAAGCCATTAGTCATTAATTCACACAAATTCG
GCATGCAGTTCGGCGCATCCAACCAAGTAATTCAAGATGACTACAATGGTCCGAGTGTGAAAACAAAATTCAAAGAGATT
GTCCAGACTGCTTATCAAGCTTCTAAAGCGGACAACAAACTGTTTCTTAACCATATTAGTGCCACTTCATTAACATTCAC
ACCTCGTCAGTATGCTGCAGCATTAAACAACAAAGTAGAGCAGTTCGTACTCAACTTAACATCGGAAAAAGTTCGAGGAT
TAGGCATTCTAATCATGGACTTCCCCGAAAAACAAACTATCAAAAACATCATAAAAAACAATAAATTCAACTAA

Protein sequence : 
MYKNYLQRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTSLAALSIPGTHDTMSYNGDMTWTL
TKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLKIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYR
IQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSHKFGMQFGASNQVIQDDYNGPSVKTKFKEI
VQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
plc AAA69526.1 phosphotidyl inositol-specific phospholipase C Virulence LIPI-1 Protein 2e-131 100
plcA CAA51230.1 1-phosphatidylinositol phosphodiesterase Virulence LIPI-1 Protein 1e-94 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM220_06567 YP_008291379.1 1-phosphatidylinositol phosphodiesterase VFG0073 Protein 3e-129 98