|
Name : LM220_22305 (LM220_22305) Accession : YP_008291361.1 Strain : Listeria monocytogenes J1-220 Genome accession: NC_021830 Putative virulence/resistance : Unknown Product : oligo-1,6-glucosidase Function : - COG functional category : - COG ID : - EC number : - Position : 2981336 - 2982997 bp Length : 1662 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAAGAAAAAGATTGGTGGAAAAAAAGCGTAGTGTACCAAATCTATCCAAAGAGTTTTAATGATTCAAATGGTGATGG AGTTGGTGATATTCAAGGAATTATCGAGAAATTAGATTATTTAAAAGAGCTAGGTGTGGACGTTATCTGGTTGTCCCCAG TATACGATTCGCCTCAAGATGACAATGGTTACGATATTCGCGATTATCAAAAAATTTACGAAGAGTATGGAGATATGGCG ACTTTTGATCAATTACTTCAAGGTTTACACGACCGCGAAATGAAACTTGTAATGGATCTTGTTGTTAACCATACTTCTGA TGAACACAAGTGGTTTGAGGAATCCAGAAAATCCAAAGACAACCCGTACAGAGATTACTATTTCTGGCGCGAGGAAAACG AAATCAATAACTGGGGCTCGATTTTCAGCGGTCCAGCATGGGAATTGGACGAAAAAACAGGTGAGTACTATTTACACCTG TTCTCCAAAAAACAGCCTGATTTAAACTGGGAAAACCCTAAATTACGCCAAGATGTATATAATATGATGAAATTCTGGCT AGATAAAGGCATTGATGGCTTCCGCATGGATGTAATTAATTTTATTTCCAAAAATACTGATTTCCCAGATGGTCCAGTAC CAGATGGTCAAATTTATGGCGATGCTGGCAATGATTTTTGTAATGGACCGCGGATTCATGAGTTCTTGCAAGAAATGAAC CAAGAAGTTACTTCTAAATACGATGTGATGACTGTTGGCGAAATGCCTGGTGCTAGTACAACCGACGCGCAAATTTACAC GAATCCAGCAAATAATGAAGTCGATATGATTTTTACATTTGAACATATGAACTTAGATTCCGATGGCGACAATAAATGGG ATCTAAAACCAATCTACTTACCAGATTTAAAAGAAAATATGTCTGAATGGCAAGTGGCGCTTCAAGAAAACGGTTGGAAT AGCTTATATTGGAATAATCATGACCAACCGCGTATCGTTTCTCGTTTTGGGAATGACAATCGTTTCCGCGTTCGTTCAGC GAAAATGCTTGCAACTTGTTTGCATATGATGAAAGGAACGCCATATATTTATCAAGGTGAAGAAATTGGGATGACGAATG TTCATTTTGAAACGCTAGATGATTACCGTGATATCGAAACGCTAAACATGTACAAAGAGCGTAAGGAGCAAGGACACAGC CATGAAAGCATCATGCAGTCGATTTACACAAAAGGCCGTGACAATGCGAGAACGCCGTACCAGTGGGATAATAGCGAGAA TGCTGGCTTCACAACCGGAACGCCTTGGCTTAAAGTCAACCCGCGCTATACAGAAATCAACAACGAAGAAGCGCTGAAAA ACCCAGATTCCATTTTCTACTACTACCAAAATCTTATTAAGTTACGAAAAACGACTGAAATCATCACAACTGGTAATTAT CGTTTGTTATTACCTAAAGATGAAGCGATTTTCGCATATGAACGCTACACAGAAAATGAAAAATTAGTGGTTTTATGTAA TTTCACAGAAGAAGAACAAGTTATTTCTGATGAAAACATTTTGAACGAAATCCAAAAAGGTTCCGTGCTTGTAAACAATG TTCCTAATATTATAGAAGGAACTTTACGACCTTACGAAGCAATCGTTTATCAAATCAAGTAA Protein sequence : MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKELGVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMA TFDQLLQGLHDREMKLVMDLVVNHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQIYGDAGNDFCNGPRIHEFLQEMN QEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDMIFTFEHMNLDSDGDNKWDLKPIYLPDLKENMSEWQVALQENGWN SLYWNNHDQPRIVSRFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLDDYRDIETLNMYKERKEQGHS HESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEEALKNPDSIFYYYQNLIKLRKTTEIITTGNY RLLLPKDEAIFAYERYTENEKLVVLCNFTEEEQVISDENILNEIQKGSVLVNNVPNIIEGTLRPYEAIVYQIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 8e-151 | 56 |
