Gene Information

Name : LM220_22005 (LM220_22005)
Accession : YP_008291229.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2854880 - 2855362 bp
Length : 483 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGATGAATCGTGTAGTACTTGTAGGACGATTAACAAAAGACCCTGAATTACGTTACACTCCAGCAGGCGTAGCAGTAAC
GACTTTTACATTAGCTGTAAACCGCGCTTTCACTAATCAGAATGGAGAACGAGAAGCCGACTTTATTCAATGTGTTGTTT
GGCGTAAACCAGCGGAAAATGTTGCTAATTTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGTCGAATACAGACTCGA
AATTATGAGGACAACGACGGTAAACGCGTTTTCGTTACGGAAGTAGTTGCTGAATCAGTTCAATTCTTAGAGCCAAAAAA
TAACAACGTAGAAGGCGCTACATCGAATAATTATCAAAACAAGGCTAATTATTCAAATAACAATCAAACAAGCTCATATC
GAGCGGATACGAGCCAGAAGAGCGATTCATTTGCAAGTGAAGGTAAGCCGATAGATATTTCAGATGATGATTTGCCATTT
TAA

Protein sequence : 
MMNRVVLVGRLTKDPELRYTPAGVAVTTFTLAVNRAFTNQNGEREADFIQCVVWRKPAENVANFLKKGSMAGVDGRIQTR
NYEDNDGKRVFVTEVVAESVQFLEPKNNNVEGATSNNYQNKANYSNNNQTSSYRADTSQKSDSFASEGKPIDISDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-39 56
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 1e-33 55
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 3e-40 55
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-40 55
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-40 55
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-40 55
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-40 55
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-36 51
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-36 51
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 2e-22 47