|
Name : LM220_21350 (LM220_21350) Accession : YP_008290915.1 Strain : Listeria monocytogenes J1-220 Genome accession: NC_021830 Putative virulence/resistance : Unknown Product : ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 2560777 - 2562462 bp Length : 1686 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAGTATATCGTGATGCAAGATGCGTTTTTTGTTGTATTGTTATTAGTTTTGGCGGTGCCTCTTGGAATTTATATGTA TAAGGTGATGATTGGGGAAAAGGTATTTTTGTCACGAGTGCTTGAGCCGGTTGAGCGGTTTGGTTATCGATTGATGGGTG TGAGTGAGGTTGGCATGTCGGCGAAGCGTTATGCAGTATCCGTACTTGCTTTTAGTGCAGTTGGCTTTGTATTTGTAATG GCGGTGTTGATGCTACAAGGCTTTTTACCGCTCAACCCGGAAGGTATGAAAGGACTTAGTTTTAGTCTTGCATTTAATAC GGCGGCGAGTTTTGTGTCGAATACGAACTGGCAAGCTTATTCTGGTGAGGCGGCGTTATCTTATTTTTCGCAGTCGATTG GTTTAACGGTGCAGAACTTTGTTTCGGCAGCGACAGGGATTGCAGTATTATTTGCGGTAATTCGTGGCTTTATATGGAAG AAACAGAAAACGATAGGAAATTTTTGGCAAGATTTATTTCGAGTGACGCTATATATTCTATTACCACTTTCGCTTATTTT GGCGCTTCTTTTAGTATCGCAAGGAGTGGTGCAGTCATTTGCTGATTATTCGGTTGTGGAGACGCTTGAAAATGGAGCAA AACAATTGATTCCGCTTGGTCCAGCTGCAAGTCAAATTGCGATTAAACAACTGGGAACGAATGGTGGAGGCTTTTTCGGG GCAAATTCGGCGTTTCCGTTTGAAAACCCATCTAGTTTTACTAATTTAATAGAAATGTTGGCGATTTTACTTATCCCAGT GGCGCTTGTTGTGATGTTTGGGCGTGCGGTGAAGGATAGTAAGCAAGGACGCGCGATTATGACAGCGATGATGATTGTTT TTGTTATTGGTGTTGTTGCGATTACTATCTCCGAACAATTTGCAGGTCCACATTATCAAGGTGTTGCGACTTCTGGCAGT ATGGAAGGAAAAGAGGTTCGTTTTGGTGTTGGCGGTTCGTCGCTTTTTGCAGCTTCCACGACGGCAGCCTCGAATGGAGC GGTGAACGCAATGCACGACAGTTTGACTCCGCTCGGTGGGCTGGTCCCAATGTTCTTTATGCAACTCGGGGAGGTTATTT TTGGCGGTGTTGGTAGCGGGCTTTATGGCATGATTGGTTTTATTATTTTGACGGTGTTTATTGCGGGGCTTTTGGTTGGA CGGACGCCGGAATATTTAGGGAAGAAAATTGAACCTTATGATATGAAAATGGTTTGTTTGCTTATTTTGGTTCCGCCGCT GTTGACTTTGTTTGGAACTGCGGTTGCGGTGATGATGCCAAGTGTGCAAGCTTCTGTTTCGGCGAGTGGGGCGCACGGTT TTTCCGAGGTCCTCTATGCATTTACTTCGATGGGAAATAATAATGGTAGTGCTTTTGCTGGATTTGCGGCGGACACGACG TTTACAAATATGGTTGGCGCAGTAATGATGTTACTTGCTCGTTTTATTCCACTTGTTGCGGCGCTTTATTTAGCGCAAAA TATGGCTGGAAAGAGTTCGGTTGCAGCGAGTAGCGGGACGTTATCGACGAAAAATGGCATGTTTATTGGTCTTTTAATTG GTGTTGTGGTACTTGTTGGCGCACTTAGTTTCTTGCCAGCACTTGCGCTTGGACCGATTGCAGACTTCTTTACAACTTTC AAATGA Protein sequence : MKYIVMQDAFFVVLLLVLAVPLGIYMYKVMIGEKVFLSRVLEPVERFGYRLMGVSEVGMSAKRYAVSVLAFSAVGFVFVM AVLMLQGFLPLNPEGMKGLSFSLAFNTAASFVSNTNWQAYSGEAALSYFSQSIGLTVQNFVSAATGIAVLFAVIRGFIWK KQKTIGNFWQDLFRVTLYILLPLSLILALLLVSQGVVQSFADYSVVETLENGAKQLIPLGPAASQIAIKQLGTNGGGFFG ANSAFPFENPSSFTNLIEMLAILLIPVALVVMFGRAVKDSKQGRAIMTAMMIVFVIGVVAITISEQFAGPHYQGVATSGS MEGKEVRFGVGGSSLFAASTTAASNGAVNAMHDSLTPLGGLVPMFFMQLGEVIFGGVGSGLYGMIGFIILTVFIAGLLVG RTPEYLGKKIEPYDMKMVCLLILVPPLLTLFGTAVAVMMPSVQASVSASGAHGFSEVLYAFTSMGNNNGSAFAGFAADTT FTNMVGAVMMLLARFIPLVAALYLAQNMAGKSSVAASSGTLSTKNGMFIGLLIGVVVLVGALSFLPALALGPIADFFTTF K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 2e-90 | 57 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 2e-90 | 57 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-51 | 45 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 1e-52 | 45 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 1e-51 | 45 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-51 | 45 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-51 | 45 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-51 | 45 |
