|
Name : LM220_18060 (LM220_18060) Accession : YP_008288659.1 Strain : Listeria monocytogenes J1-220 Genome accession: NC_021830 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 257712 - 259604 bp Length : 1893 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGAAAGAAAAGCACAACCCAAGAAGGAAATATTGTTTAATCTCAGGTTTAGCTATTATTTTTAGTTTATGGATAATTAT TGGAAACGGGGCGAAAGTACAAGCGGAGACTATCACCGTGTCAACGCCAATCAAGCAAATTTTTCCAGATGATGCTTTTG CAGAAACAATCAAAGACAATTTAAAGAAAAAAAGTGTGACGGATCTAGTGACACAAAATGAATTAAATAGTATAGATCAA ATCATTGCGAATAATAGTGATATTAAATCCGTTCAAGGAATTCAGTATTTACCCAATGTGACAAAGTTATTTTTAAACGG GAATAAACTAACAGATATAAAGCCCTTAGCAAACTTGAAAAATTTAGGATGGCTTTTTTTAGACGAAAATAAAATTAAAG ACCTAAGTTCGATCAAGGACTTAAAAAAATTAAAATCACTTTCTTTGGAGCATAATGGTATAAGTGATATAAATGGACTT GTTCATTTACCGCAACTGGAAAGTTTGTATTTGGGAAATAATAAACTAACGGATATAACGATTCTTTCACGTTTAACTAA ACTGGATACTTTGTCTCTTGAAGATAACGAAATTAGTGATATTGTGCCACTTTCAGGTTTAACTAAATTACAGAATCTAT ATTTAAGTAAGAATCATATAAGCGATTTAAGAGCGTTAGCAGGGCTTAAAAATCTGGATGTTTTAGAATTGTTTAGCCAA GAATGTTTGAATAAATCTATTAATCATCAAACGAATCTAGTTGTTCCGAACACAGTAAAAAACATTGATGGGTCGCTTGT TACTCCAGAAATAATAAGTGATGATGGCGATTATGAAAAACCGAATGTCAAATGGCATTTACCAGAATTTATAAATGAAG TAAGTTTTATTTTCTATCAACCAGTTACTGTTGGAAAAGCAAAAGCACGATTTCATGGGAGAGTAACCCAACCACTGAAA GAGGTTTACACAGTAAGTTATGATGTTGATGGAACGGTAATAAAAACAAAAGTAGAGGCAGGGACGCGAATAACTGCACC TAAACCTCCGACCAAACAAGGCTATGTTTTTAAAGGCTGGTATACTGAAAAAAATGGTGGACATGAGTGGAATTTTAGTA CGGATTATATGTCCGGAAACGATTTTACTTTGTACGCGATTTTTAAAGCGGAAACGACTGAAAAAGCAGTGAATTTAACA CGCTATGTTAAATATATTCGCGGGAATGCGGGGATCTACAAACTTCCAAGAGAAGATAACTCGCTTAAACAAGGAACGCT TGCCTCGCACCGCTGTAAAGCTTTAACTGTTGATAGAGAAGCGCGAAATGGCAGTGAATTATGGTACAGGTTAAAAAATA TTGGCTGGACCAAAGCTGAAAATCTTTCCTTAGACCGTTACGATAAAATAGAATATGACAAAGGTGTTACTGCTTATGCA AGAGTGAAAAATGCGCCAGGGAATGCAGTTTGGACGAAACCTTACAATACAGCCGGCGCAACCCTCGTGAACAAGCTTTC CGTCTACCAAGGTAAAAATATGCGAATATTGCGCGAAGCCAAAACACCAATTACCACGTGGTATCAATTTAGCATTGATG GTAAAGTGATTGGTTGGGTCGATACGCGTGCACTTAACACATTTTATAAACAAAGCATGGAAATACCAATCCAATTAACT CGATACGTCAACGCAAATAAAGGAAATGAAGCATACTATAAAGTTCCGGTAGTAGATAGCCCAATCAAATGGGGAACTTT AGCCAAGTATAAAAATCAAACATTAATTGTCGATCGAACAGCCACCGTTGAAGGTCAGCTTTGGTATCGGATAAGAACTA GCTCCACTTTCATTGGTTGGACGAAAGCTGCTAATTTAAGGGCACAGAAATGA Protein sequence : MKEKHNPRRKYCLISGLAIIFSLWIIIGNGAKVQAETITVSTPIKQIFPDDAFAETIKDNLKKKSVTDLVTQNELNSIDQ IIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKIKDLSSIKDLKKLKSLSLEHNGISDINGL VHLPQLESLYLGNNKLTDITILSRLTKLDTLSLEDNEISDIVPLSGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQ ECLNKSINHQTNLVVPNTVKNIDGSLVTPEIISDDGDYEKPNVKWHLPEFINEVSFIFYQPVTVGKAKARFHGRVTQPLK EVYTVSYDVDGTVIKTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFSTDYMSGNDFTLYAIFKAETTEKAVNLT RYVKYIRGNAGIYKLPREDNSLKQGTLASHRCKALTVDREARNGSELWYRLKNIGWTKAENLSLDRYDKIEYDKGVTAYA RVKNAPGNAVWTKPYNTAGATLVNKLSVYQGKNMRILREAKTPITTWYQFSIDGKVIGWVDTRALNTFYKQSMEIPIQLT RYVNANKGNEAYYKVPVVDSPIKWGTLAKYKNQTLIVDRTATVEGQLWYRIRTSSTFIGWTKAANLRAQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlB | CAC20629.1 | internalin B | Virulence | Internalin | Protein | 0.0 | 94 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LM220_18060 | YP_008288659.1 | internalin | VFG0076 | Protein | 0.0 | 94 |
