Gene Information

Name : LM220_20725 (LM220_20725)
Accession : YP_008290491.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Resistance
Product : arsenical resistance operon trans-acting repressor ArsD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2123017 - 2123388 bp
Length : 372 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAGTAAAGTATCGTTGTATGAACCAGCAATGTGTTGTGACACAGGAGTTTGTGGTCCCGGAGTAGATACAGAATTGCT
TCGAGTTTCCTCTATTATTCAAACATTGGAAAAAGCCGATGGTGTAGAAGTAGAGCGTTTTAATTTAACAGGTAATCCTG
CGGCATTCATAGAAAATGAAAAAATTGGGGAGTTGTTACAGTCTAAAGGAGCCGACATACTACCAGTTGTTTTATTAGAT
GGTGAAATTGTGAAAATGGCTGGTTATCCGTCAAATGAGGAGTTTAGTGTCTATACTGGTGTTAATTTCTCAGAGGATAA
GAAAGAAGAACAATCAAATAGTTGCTGCTCTCCATCATCTGGATGTTGCTAA

Protein sequence : 
MSKVSLYEPAMCCDTGVCGPGVDTELLRVSSIIQTLEKADGVEVERFNLTGNPAAFIENEKIGELLQSKGADILPVVLLD
GEIVKMAGYPSNEEFSVYTGVNFSEDKKEEQSNSCCSPSSGCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsD YP_001007631.1 arsenical resistance operon trans-acting repressor Not tested YAPI Protein 3e-19 42
arsD YP_252027.1 hypothetical protein Not tested SCCmec Protein 3e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM220_20725 YP_008290491.1 arsenical resistance operon trans-acting repressor ArsD BAC0587 Protein 7e-20 44
LM220_20725 YP_008290491.1 arsenical resistance operon trans-acting repressor ArsD BAC0033 Protein 3e-19 43