Gene Information

Name : LM220_20715 (LM220_20715)
Accession : YP_008290489.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Resistance
Product : arsenic transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2120892 - 2122631 bp
Length : 1740 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGAAATGTATCAACCAGAGGCAATTCATTTAACGAAATATCTATTTTTCACAGGTAAAGGAGGCGTTGGGAAAACTTC
TACAGCTAGTGCTACAGCAACTTATCTAGCTGACAAAGGGAAACAAGTCATGTTGGTTAGTACCGACCCAGCAAGCAATT
TGCAGGATGTCTTTGAATTAGAACTCTCAAATAAAGGGACTAAAATTCCTAATGTAGAAGGTTTAGTTGTCGCCAACTTT
GACCCTGTGGAGGCGGCTAATGACTATAAAGAAAGTATTGTAGGACCTTATCGTGGTAAATTGCCAGATTCAGTTTTGGA
AAATATGGAAGAACAATTGTCAGGCTCTTGTACTGTAGAGATAGCCTCATTTAATGAATTTGCCAATTTTTTAACGGATA
AAGAAGCCTCTACAAAATTTGATCATATTATTTTTGATACTGCCCCAACAGGTCATACTCTGAGAATGCTTCAATTACCT
TCTGCTTGGAATAATTATTTAGATGAGAATGAGACCGCAACTGCTCCTTTAGGACAATTATCAGGTGCTGTAGACAAAAA
AGAAATGTATGATCTAGCTGTTAAAACCTTAATTGACGGTCAGAAAACGACGTTGATGTTGGTAACGAGACCGCAAAAAA
CGTCTTTATTAGAAGCAGATAGAGCGTCAAAAGAATTGGAAGAAATGGGGATTAAAAATCAAGCATTAATTATTAATGGG
GTACTGGAAGAAGCAACAGATAAAGTCTCTGAGGAATTTTATGCTATTCAACAGGAAGCATTAAAACAGATGCCAGCAAG
TTTAGCTAAGTATCCAGAATATTTTGTACCATTACGTCCATATAATTTAACTGGAATTGAAAATATTAGAAAATTATTGA
ATGAACATCAAGAAGAACTATTGACGGGATCAATTAAACCAAAAGAATTTCCCCACTTACAAGCCATTGTGGATAATTTA
TATAAAACGGATAAAAAAGTTATTTTTACAATGGGTAAAGGTGGCGTAGGGAAGACGACGATAGCCGCAGCAATTGCAAT
GGCATTAGCGGATAAAGGGAAAAAAGTTCATTTAGCAACGACTGATCCAGCAGCACATCTTCAATTTGTTATTTCAGAAA
CTGACAAAATTAGCGTGAGTCATATTGATGAAGAAAAAGAACTAGCAGATTATCAGTCTGAGATATTAACAAAAGCTCGT
GAAACAATGTCAGAAGAAGATGTGGCATATGTTGAAGAAGACTTACGTTCCCCTTGCACACAAGAGATTGCTGTTTTTAG
AAAGTTTGCGGAAATAGTTGAAGGAGCAGATAGTGATGTTGTTGTGATTGATACCGCACCAACAGGTCATACACTATTGC
TATTAGATTCAACACAAAGCTACCACAAAGAGATTGAACGTTCTTCTGGAGATATACCCGAGTCTGTTCAAAAGCTACTG
CCTAAGTTACAAAATGGGGATGAAACAGAAGTAGTAATGGTCACATTACCCGAAGCAACACCTGTTTATGAATCAATTCG
ATTAAAAGATGACTTGGAGAGAGCGGGAATCGCTCGTACTTGGTGGGTAGTGAACAATAGCATGCTTTCTAGCGGAACAA
CGAACCCAATGCTTTTAGCAAGAGCACAAAATGAAGAAGTTTGGATTGATAAGGTAGCAGAGCTGTCTAACAATCATTAC
GCAGTGATTGAATGGAAAGCTGAGGATATTTCAGGAGATGCTTTAAGAGATATTTTATAA

Protein sequence :
MEMYQPEAIHLTKYLFFTGKGGVGKTSTASATATYLADKGKQVMLVSTDPASNLQDVFELELSNKGTKIPNVEGLVVANF
DPVEAANDYKESIVGPYRGKLPDSVLENMEEQLSGSCTVEIASFNEFANFLTDKEASTKFDHIIFDTAPTGHTLRMLQLP
SAWNNYLDENETATAPLGQLSGAVDKKEMYDLAVKTLIDGQKTTLMLVTRPQKTSLLEADRASKELEEMGIKNQALIING
VLEEATDKVSEEFYAIQQEALKQMPASLAKYPEYFVPLRPYNLTGIENIRKLLNEHQEELLTGSIKPKEFPHLQAIVDNL
YKTDKKVIFTMGKGGVGKTTIAAAIAMALADKGKKVHLATTDPAAHLQFVISETDKISVSHIDEEKELADYQSEILTKAR
ETMSEEDVAYVEEDLRSPCTQEIAVFRKFAEIVEGADSDVVVIDTAPTGHTLLLLDSTQSYHKEIERSSGDIPESVQKLL
PKLQNGDETEVVMVTLPEATPVYESIRLKDDLERAGIARTWWVVNNSMLSSGTTNPMLLARAQNEEVWIDKVAELSNNHY
AVIEWKAEDISGDALRDIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsA2 YP_001007632.1 arsenical pump-driving ATPase Not tested YAPI Protein 1e-108 46
SH0111 YP_252026.1 arsenical pump-driving ATPase Not tested SCCmec Protein 7e-122 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM220_20715 YP_008290489.1 arsenic transporter ATPase BAC0572 Protein 2e-108 47
LM220_20715 YP_008290489.1 arsenic transporter ATPase BAC0571 Protein 2e-111 46
LM220_20715 YP_008290489.1 arsenic transporter ATPase BAC0030 Protein 1e-109 46