|
Name : LM220_01025 (LM220_01025) Accession : YP_008290321.1 Strain : Listeria monocytogenes J1-220 Genome accession: NC_021830 Putative virulence/resistance : Virulence Product : choloylglycine hydrolase Function : - COG functional category : - COG ID : - EC number : - Position : 1942726 - 1943703 bp Length : 978 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGTGTACGTCAATAACTTATACAACGAAGGATCACTATTTTGGAAGGAATTTCGATTATGAACTTTCTTACAAAGAAGT TGTGGTTGTTACGCCGAAAAATTACCCGTTCCATTTTCGCAAGGTAGAGGATATAGAGAAGCATTATGCACTTATTGGTA TTGCTGCTGTGATGGAAAACTACCCGTTGTATTACGATGCTACCAATGAAAAAGGCCTTAGTATGGCAGGACTCAATTTC TCAGGAAATGCGGATTACAAGGATTTTGCAGAAGGTAAGGACAATGTAACGCCATTTGAATTTATTCCGTGGATTCTTGG TCAATGCGCTACTGTAAAAGAAGCAAGAAGATTACTTCAGAGAATCAATCTCGTGAATATTAGCTTTAGTGAAAATTTGC CGCTATCTCCTTTACATTGGTTGATGGCTGATCAAAACGAATCTATTGTAGTGGAATGTGTGAAAGATGGACTTCACATT TATGATAATCCTGTTGGCGTGTTAACAAATAATCCAACATTTGATTACCAACTATTTAATTTAAACAATTATCGCGTTCT TTCGAGTGAAACTCCAGAAAATAATTTTTCCAACGAGATTGATTTGGATGCTTATAGTCGTGGGATGGGCGGAATCGGCT TACCTGGCGATTTATCTTCTATGTCTCGTTTTGTGAAAGCAACTTTTACCAAATTGAATTCTGTTTCAGGTGATTCTGAA TCAGAAAGCATTGGCCAATTTTTCCATATTTTAGGCTCGGTGGAACAACAAAAAGGTCTTTGTGATGTTGGTGGGGAAAA ATACGAGCACACCATTTATTCCTCATGTTGCAATATCGATAAAGGAATTTATTATTATAGAACATACGGAAACAGTCAAA TTACTGGTGTGGATATGCACCAAGAGGATTTAGAGAGCAAAGAACTAGCTATTTATCCACTCGTTAATGAGCAACAACTA AACATTGTTAATAAATAA Protein sequence : MCTSITYTTKDHYFGRNFDYELSYKEVVVVTPKNYPFHFRKVEDIEKHYALIGIAAVMENYPLYYDATNEKGLSMAGLNF SGNADYKDFAEGKDNVTPFEFIPWILGQCATVKEARRLLQRINLVNISFSENLPLSPLHWLMADQNESIVVECVKDGLHI YDNPVGVLTNNPTFDYQLFNLNNYRVLSSETPENNFSNEIDLDAYSRGMGGIGLPGDLSSMSRFVKATFTKLNSVSGDSE SESIGQFFHILGSVEQQKGLCDVGGEKYEHTIYSSCCNIDKGIYYYRTYGNSQITGVDMHQEDLESKELAIYPLVNEQQL NIVNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0521 | NP_814299.1 | choloylglycine hydrolase | Not tested | Not named | Protein | 3e-119 | 75 |
| ef0040 | AAM75246.1 | EF0040 | Not tested | Not named | Protein | 2e-119 | 75 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LM220_01025 | YP_008290321.1 | choloylglycine hydrolase | VFG2162 | Protein | 4e-150 | 99 |
