Gene Information

Name : LM220_09260 (LM220_09260)
Accession : YP_008290097.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1710826 - 1711758 bp
Length : 933 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAAAAATAATAGTTGTAGCTCTTTTCGCATTAGTAGTTGTGCTTGCGGGGTGTTCCAGTCAAAATAGCGATTCGAA
AAAAACAGACGGCAAATTAAATGTCGTAGCCACCTATTCGATATTAGCAGATATTGTAAAAAATGTAGGCGGGGATAAAA
TTGAACTGCATAGTATTGTGCCTGTTGGCGTTGATCCACATGAATATGATCCCTTGCCAGCCAACATTCAAAGTGCTGCG
GATGCTGATTTAATCTTTTACAATGGATTGAATTTGGAAACAGGGAATGGTTGGTTTGATCGTATGTTAGAAACGGCGGA
TAAATCAAGAGACGACAAGGAGCAAGTGGTGGAGTTAAGTAAAGGTGTAAAACCCAAATACTTAACGGAAAAAGGCAAGA
CGTCTGAAACAGATCCACATGCATGGCTTGATCTTCATAACGGAATTATCTATACTGAAAATGTTCGTGATGCACTTGTA
AAAGCGGATCCAGACAATGCGGATTTTTATAAAGAGAATGCGAAAAAATATATCAACAAATTAGCTACTCTGGATAAAGA
AGCAAAACAAAAATTTGCAGATTTGCCAGAAAATCAAAAAACATTAGTAACTAGCGAAGGTGCCTTTAAATATTTTGCAG
CTCGCTACGGATTAAAAGCAGCATATATTTGGGAGATAAATACAGAAAGTCAAGGTACTCCAGACCAAATGAAACAAATT
GTCGGTATCGTGGAAAAAGAAAAAGTACCTAATTTATTTGTCGAAACAAGCGTAGATCCACGTAGTATGGAAAGTGTATC
TAAAGAAACAGGCGTACCAATTTTTGCAAAAATCTTCACGGACTCCACTGCTAAAAAAGGTGAAGTGGGCGACACGTATT
TAGAAATGATGCGGTACAATTTAGATAAAATTCATGATGGTTTAGCCAAATAA

Protein sequence :
MKKIIVVALFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILADIVKNVGGDKIELHSIVPVGVDPHEYDPLPANIQSAA
DADLIFYNGLNLETGNGWFDRMLETADKSRDDKEQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV
KADPDNADFYKENAKKYINKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQI
VGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEMMRYNLDKIHDGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 3e-78 55
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 3e-78 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM220_09260 YP_008290097.1 manganese ABC transporter substrate-binding protein VFG2157 Protein 1e-134 99
LM220_09260 YP_008290097.1 manganese ABC transporter substrate-binding protein VFG2165 Protein 5e-83 61
LM220_09260 YP_008290097.1 manganese ABC transporter substrate-binding protein VFG1359 Protein 1e-78 54