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Name : LM220_05057 (LM220_05057) Accession : YP_008288562.1 Strain : Listeria monocytogenes J1-220 Genome accession: NC_021830 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 166461 - 168230 bp Length : 1770 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAATCCAAAGGGAGACTGTTTTTGTACGTTGTTTTGGCGTTGTCGATTGTTATTGGGACGAATGTATTTATAAAAAT AGACGCACATGCAGCCGCTGCACCACCAGCTGCAATCAGCCAGATTTTTCCCGATGATGCTTTAGCGACAGAAATTCAAA CTACACTCGGAAAGTCTAGTACAGCAGAGGTTGTCACTCAAACAGATTTAGATACTATTAATTCATTAACCCTTACTTCT AAAGGTATCAGCTCCCTAGAAGGTATGAACTACTTGACCAATTTAGGAACTTTAATTTTAACTGGTAATCAAGTAAGCGA TATTTCGCCACTTAAAGGCTTAACTAACTTGACCATGCTTCAGCTGAGTGGAAATCCGATTAGCGACATTAGCGCACTTA GTAACTTGAAAAACTTACAAGCTCTAGATATTAACGACGCGCAAGTTACTGACATCACGCCACTGAGCGGTTTAACAAAT CTAAAGGGTTTAGGCTTATATAATAATCAATTGGAGAACCTTAGTGGAGTAAATAGTTTACATCAACTCCGCTCCTTAAA TGTTAGTAATAATAAGCTTACGAACCTAGATGAGCTACAAGCGCTAAGCAATTTAAGCGTTCTATATGCAAATGAAAACC AAATTAACAATCTTCAGGGGCTAAGTAATTTAAATAACCTTTTCTTGCTTGATTTATCAGCGAACCAAATTGTGGATACT ACTCCACTCGCTGGCTTAACTAAGGTACAAACATTATACGTATCAAACAATCAAATTAGTGATGTAACTGGTCTTTCGAG TTTAATAAATCTAGATTGGCTCGATATAAGCCAAAATAAAATTAGTAACATTAGACCTTTAAACAGTTTAACGAAGCTAA CAATTATTCAAATGACTAATCAATTAATCGTAAACGAACCGATAAGTTTCGAAAGCACTGTAACGATTCCTAATTTAATA AAAAACATTGCGGAACAAACGATTGATCCCGATACAATTAGCGATAACGGTGTGTATGCGAATGAAGCTGTTACATGGAA TTTACCTAGTTATATTCCTAAAGTCAGCTACACCTTTATTGAACGTGATACGATTGGTAATGCAACTGGAAATTTCAGTG GGACTGTAGAACAACCATTAGTACAATATTTTAAAGCAACTTTCAATATTGACGGGCAAGAAACAACGGAAAATGTCGAA ACAGGGACACTTTTACAAGAACCACCAACCCCAGTCAAAGAGGGTTATACATTTAACGGATGGTATGATGCTGAAACAGG TGGAACAAAATGGGACTTTACAGCCGATACGATGCCAGCAAATGATATAACGTTGTATGCCCAGTTTAGTATTAATAGTT ATACCGCAACTTTTGATGTAGATGGCGTCATTTCTACTCAAGCGGTAGAGTATCAAGGTTTACTGGAAGAGCCACCAGCG CCAACTAAGGATGGTTATACATTTAAAGGTTGGTATGATGCCAAAACTGGTGGAACAAAATGGGACTTCACAAACAATCA AATGCCAGCAAATGATATAACCTTGTATGCCCAGTTTAGTAAAGATGCATCTTCTGGTGGGGACGGTGGAGGAACCGATG AAGGTGGAGGTAACTCTGAAAATAGTACAGAGGGAGCTCCTAATACGAGTGATATAGATACTATAAACCACATCGTACTA CCAGCAACAGGAGATGACCATGTGCTTTTTCCAATCTTTATTGGAACATTTCTTACGAGTTTAGCATTACTTACACTTAG AAGAAAATAA Protein sequence : MKSKGRLFLYVVLALSIVIGTNVFIKIDAHAAAAPPAAISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTS KGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTN LKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDT TPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIVNEPISFESTVTIPNLI KNIAEQTIDPDTISDNGVYANEAVTWNLPSYIPKVSYTFIERDTIGNATGNFSGTVEQPLVQYFKATFNIDGQETTENVE TGTLLQEPPTPVKEGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDASSGGDGGGTDEGGGNSENSTEGAPNTSDIDTINHIVL PATGDDHVLFPIFIGTFLTSLALLTLRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 1e-111 | 47 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 3e-109 | 44 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 2e-110 | 44 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 2e-109 | 43 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 5e-86 | 43 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 2e-86 | 43 |
