Gene Information

Name : LM220_12122 (LM220_12122)
Accession : YP_008289815.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1389049 - 1391706 bp
Length : 2658 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGAATGACAATATCGAGGAGGATATCCCTGTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCCTT
TTATGCTTTACCGCTTTTAAATAATGATAAAGGTGTTTACACAAATGCGGTGTATGGTTTCGCAATGATGTTGATGAATG
TACTCGAAAAAGAAAAACCTAGCCATGTGCTCGTTGCATTTGATGCTGGAAAAACAACTTTCAGGCATACAACATTTAAA
GGTTATAAAGGCGGACGTCAAAAAACCCCAAGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAACTTTTAACGGCGTA
TGATATCCCGCAATATGAACTTGCCAATTACGAGGCAGATGATATTATCGGAACATTGACGAAAAAAGCAGAAGCAGATG
GAATGGAAGTAGCAATCATTACCGGAGACCGCGACTTAACGCAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAA
AAAGGCATAGCCGATATGGAAACCAACACACCAGAAACACTAAAAGAAAAATACAATCTGACTCCTGAACAAATCATTGA
TATGAAAGGCTTAATGGGTGATTCCTCCGATAATATTCCTGGTATTCCAGGCGTTGGTGAAAAAACTGCCTTAAAACTCT
TACATGAATTTGGTGGAACGGTGGAAAGTGTGTTAGAGCATGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTA
CTGGAAAATAAAGAATTAGCTATTTTAAGTAAAGAGTTAGCTACAATCAATGTGGATTCACCGATTGAATGCACGGTCGA
AAGCACGAAATACGACGGCTATCAAACAGAAAAAGTTATCCCTTTATTAAAAGAAATGAATTTTACAACACTTTTGAAAA
ATATCGAGGGAGATACACCAGAAGAAACGAAAGAACTAAAAGAGTTGTCTTTTGAAATCGTAACAGAATTAAAAGAAAAA
CATTTTGGTGGGAAAACCGCGCTTTATGTGGAGCTAGAAAACGATAATTACCATACAGCTAATTTCATTGGATTAACAGT
ACATTCTAGCCAAGGGACGTATTTCTTTACAAAAGAAACAGCCGAAAGTAGTGAGGTATTCCGCAAATGGGTAGAAAGTG
ATCAAACAAAAGTAGTGTACGATGCGAAGAAAACAATGGTTGCAATGAACCGCATTGGTTTGGCCATTTCTGGTATCACC
TTTGATATCATGTTAGCATCTTACTTGCTAAATCCATCTGATTCGATTGATGACTTTACAAGTGTTGCAATACGACATGA
TTACACAGAAGTAGAAACAGATGAAGCAGTCTACGGAAAAGGTGCTAAACGTAGCACTCCTGAAGAAAGCATTGTTGCGG
CACACTTAGCTAGAAAAGCAGTGGCTATTGCTGACTTAGAGAAAAGACTAGTTGATGATTTAGAAGAAAATGAACAACTA
GCTTTGATGGAAGACCTTGAGCTACCTCTAACTTTTGTATTAGCAGAAATGGAAATGCAAGGGGTTAGTGTAGATACAGA
ACGTCTAGAGAATATGAAAGTGGAGCTAGCGGGTAGACTGAAAACATTGGAAGAGTCGATCCATTCTCTAGCCGGCGAAG
AATTCAATATTAATTCACCGAAACAACTAGGTGTGATTTTATTTGAAAAGCTTGGTCTCCCAGCTGTCAAGAAAACAAAA
ACAGGTTATTCAACGGCTGCCGATGTACTGGAAAGTTTATCTGGTAAACACGCGATTATTGATGAAATTTTGTTATATCG
TCAACTTGGTAAAATTCAGTCCACTTATATCGAAGGGCTGCTTAAAGTGACAGATAAAGAAACACATAAAGTACACACAC
GTTTCAACCAAACATTAACGCAAACAGGACGCTTAAGTTCAGTTGATCCGAACTTGCAAAATATCCCTATTCGTTTAGAA
GAAGGACGGAAAATTAGACAAGTTTTCGTACCGAGTAAACCAGGTTGGAAAATGTTTTCAGCCGATTATTCTCAAGTAGA
GCTGAGAGTCTTAGCACATATTTCGGAAGATGAAAATTTAATTTATGCATTTAAGCACGATTATGATATTCATACGAAAA
CGGCGATGGACGTGTTTCATGTTGAGCAAGACGAAGTGGATTCATTAATGCGTCGTCAGGCTAAAGCGGTAAACTTTGGT
ATTGTATATGGAATTAGTGATTATGGGCTTTCGCAAAACCTTGGTATTACGCGTAAAGAAGCAAAAGACTTTATTGATCG
TTATTTTGTGAGCTATCCAGCTGTGAAAGAATATATGCAAGATATCGTTCGTTTTGCGAAAGAAAAAGGCTATGTAGAGA
CCATTTTACATCGTCGTCGGTATATTCCAGAGATTGTCAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACGGCG
ATGAACACGCCTATTCAAGGTAGTGCCGCTGATATTATCAAAAAAGCGATGATTCTGATGAGCGAGCGTTTAGTATCTGA
AAAATTAGAAGCAAAATTATTACTACAAGTACACGATGAATTAATCTTCGAGGCGCCTGAAGCTGAAATCGCTAAATTAG
AAGAAATTGTCCCAGATGTTATGGAAAATGCAGTAGAGCTTTCTGTACCGCTAAAAGTAGATAGCGCATTTGGTGACACT
TGGTACGACGCGAAATAA

Protein sequence :
MNDNIEEDIPVNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFK
GYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITK
KGIADMETNTPETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKV
LENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEETKELKELSFEIVTELKEK
HFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEVFRKWVESDQTKVVYDAKKTMVAMNRIGLAISGIT
FDIMLASYLLNPSDSIDDFTSVAIRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQL
ALMEDLELPLTFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEKLGLPAVKKTK
TGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLE
EGRKIRQVFVPSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFG
IVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTA
MNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDT
WYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 50