Gene Information

Name : LM1816_04642 (LM1816_04642)
Accession : YP_008286500.1
Strain : Listeria monocytogenes J1816
Genome accession: NC_021829
Putative virulence/resistance : Virulence
Product : 1-phosphatidylinositol phosphodiesterase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 926678 - 927631 bp
Length : 954 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
TTGTATAAGAATTATTTGCAACGCACATTAGTTTTAGTACTCTGTTTTATTTTATGCTTTTTTACTTTCCCATTAGGTGG
AAAAGCATATTCGCTTAATAACTGGAATAAGCCAATAAAGAACTCTGTAACTACAAAGCAATGGATGTCCGCTCTACCTG
ACACAACGAGCCTAGCAGCACTCTCTATACCAGGTACACATGATACGATGAGCTATAACGGAGACATGACGTGGACATTA
ACCAAACCACTGGCTCAAACACAAACGATGTCATTGTACCAACAACTAGAAGCAGGAATACGGTACATCGATATTAGAGC
AAAAGACAATCTCAAAATTTACCATGGGCCAATTTTTTTAAATGCATCACTTTCAGGTGTATTAGAAACGATTACTCAAT
TTTTAAAGAAAAATCCAAAAGAAACCATTATTATGCGTTTAAAAGACGAGCAAAACAGCAACGATAGTTTTGATTATCGG
ATCCAACCATTAATCAACATTTACAAAGATTATTTTTACACTACTCCCAGAACTGACACGAGCAATAAAATCCCTACATT
AAAAGATGTCCGCGGAAAAATATTATTACTTTCAGAGAACCACACAAAAAAGCCATTAGTCATTAATTCACACAAATACG
GCATGCAGTTCGGCGCATCCAACCAAGTAATTCAAGATGACTACAATGGTCCGAGTGTGAAAACAAAATTCAAAGAGATT
GTCCAGACTGCTTATCAAGCTTCTAAAGCGGACAACAAACTGTTTCTTAACCATATTAGTGCCACTTCATTAACATTCAC
ACCTCGTCAGTATGCTGCAGCATTAAACAACAAAGTAGAGCAGTTCGTACTCAACTTAACATCGGAAAAAGTTCGAGGAT
TAGGCATTCTAATCATGGACTTCCCCGAAAAACAAACAATCAAAAACATCATAAAAAACAATAAATTCAACTAA

Protein sequence : 
MYKNYLQRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTSLAALSIPGTHDTMSYNGDMTWTL
TKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLKIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYR
IQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSHKYGMQFGASNQVIQDDYNGPSVKTKFKEI
VQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
plc AAA69526.1 phosphotidyl inositol-specific phospholipase C Virulence LIPI-1 Protein 4e-131 99
plcA CAA51230.1 1-phosphatidylinositol phosphodiesterase Virulence LIPI-1 Protein 2e-94 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM1816_04642 YP_008286500.1 1-phosphatidylinositol phosphodiesterase VFG0073 Protein 7e-129 98