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Name : LM1816_09035 (LM1816_09035) Accession : YP_008286440.1 Strain : Listeria monocytogenes J1816 Genome accession: NC_021829 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 847221 - 848867 bp Length : 1647 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAAAAACGATGGAATTCTGTATTTAAACTAGTTTTAATGGTAGCTGCTATTCTCGGTATTAGTCTATATGTAACGAC AAGTCAAGGGGCGGAGGTTCGCGCGGAAAGCATTGCGCAGCCAACCCCAATTAATGTGATTTTCCCTGATCCGGCTCTTG CGAATGCAGTTAAAACAGCGACAGGAAAATCTAATGTAACAGATACTGTTACGCAAGCAGATTTAGATGGAATAGTTACT TTATCAGCATTTAATACTGGAGTAACAACGATTGAAGGAATGCAGTACTTAAATAATTTGATAGGGTTAGAACTTAAGGA TAATCAAATAACGGATTTAACTCCTCTTAAAAATTTAACGAAAATAACAGAACTTGAATTATCTGGAAACCCGTTAAAAA ATGTAAGCGCGATTGCTGGGTTACAAAGCATTAAAACGCTAGATTTAACTTCTACGCAAATTACAGATGTGACTCCACTT GCAGGGCTTTCCAATTTGCAGGTATTATATTTGGATCTCAATCAAATAACCGATATAAGCCCGCTTGCAGGACTCACTAA TTTACAATACTTATCAATCGGAAATACCCAAGTAAGTGATTTAACCCCACTTGCTAATTTATCTAAACTAACGAATTTAA GAGCTGATGATAATAAAATAAGTGATATTTCGCCACTTGCGAGTTTACCTAACCTTATAGAAGTTCATTTGAAAGATAAT CAAATTAGTGATGTCAGCCCACTTGCTAATTTATCGAACTTATTTATCGTCACTTTAACGAATCAAACAATTACCAACCA ACCCGTGTATTATCAAAATAATCTTGTCGTTCCTAATGTGGTAAAAGGTCCTTCTGGCGCTCCTATTGCACCTGCTACTA TTAGCGACAATGGAACATATGCTAGTCCAAATTTAACATGGAATTTAACTAGTTTTATTAATAATGTTAGCTACACGTTT AACCAATCAGTCGCTTTCAAAAATACAACGGTTCCTTTCAGTGGCACAGTTACACAACCATTAACAGAAGCTTATACTGC GGTTTTTGATGTGGATGGAAAACAAACAAGTATGACTGTCGGCGCGAATGAATTAATTAAAGAACCAACAGCACCGACGA AAGAAGGTTACACTTTCACAGGCTGGTATGATGCCAAAACTGGCGGGAATAAATGGGATTTCAGCACGGATAAAATGCCA GCAGAAAATATCACATTGTATGCTCAGTTCACGATTAATAGTTATACTGCCTCATTTGACAATGATGGGAAAATAACGAC GCAAAAAGTCACTTATCAAAGTTTGTTAGAAGAACCAGCAGCACCAACGAAAGCAGGTTATACGTTCAAAGGTTGGTACG ATGCTAAAACTGGTGGAACTAAATGGGATTTTGCGACAGGAAAAATGCCAGCAGGAAATATTACGCTATATGCCCAATTC ACTAAAAATGATAGCCCAAATCCAAATGATCCAACCCCTAATACCCCAACAGGAAATGGTGATGGTACAAGCAATCCAAG CAATTCAGGAGGCAATACTACACTTCCGACAGCTGGGGATGAAAATACCATGCTGCCCATTTTTATCGGAGTTTTCTTGT TAGGGACAGCAACGCTAATTCTCCGCAAATCAATCAAAGTAAAATAA Protein sequence : MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTATGKSNVTDTVTQADLDGIVT LSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPL AGLSNLQVLYLDLNQITDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLASLPNLIEVHLKDN QISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTF NQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSMTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMP AENITLYAQFTINSYTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQF TKNDSPNPNDPTPNTPTGNGDGTSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRKSIKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 0.0 | 96 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 0.0 | 95 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 0.0 | 94 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 4e-132 | 71 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 2e-132 | 71 |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 7e-133 | 71 |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 1e-147 | 61 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 3e-100 | 49 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 1e-100 | 49 |
