|
Name : LM1816_09050 (LM1816_09050) Accession : YP_008286438.1 Strain : Listeria monocytogenes J1816 Genome accession: NC_021829 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 843612 - 845111 bp Length : 1500 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAAAGAAACAAAGTAATATTAAGAATCGTAGTGACTTTAGCTGCAGTATTGGCAATTACTTTTTGGGTTGGGATGAG CTCAAAAGAAGTAGAAGCAGCGGTAATTGAACAACCAACCCCTATTAATGAAATTTTTACTGATCCAGTGGTTGCTGATA ATGTGAAAACACTTCTCGAAAAAGCGGATGTAACAGATGAAGTTACGCAAACTGATTTAGATAGTATAACCCAATTATCA GCTAAATCTGCGGGAATAACAACGATAGAAGGAATGCAGTACTTAACTAATTTATCAGAACTAGAACTAACAGATAACCA AATAACCGATGTAAGTCCGCTCGCAAATTTAACGAAAATAACAGAGCTTGGATTATCCGGAAATCCATTAAAAGATGTGA GTGCGCTTGCGGGATTAAAAAGTCTAACAACGATGCATCTTATTTATACAGATATTACCGATGTGACTCCCCTTGAAGGT CTTACCAATTTGCAGGAATTAAATTTGGATATCAATCAAATAACGGATATAAGTCCACTAGCAGCTTTAACTAACTTGCA AACATTATCACTCGGATATACCCAAGTTAGTGATTTAACCCCAATTGCTAATTTATCTAAACTAACCATATTAAACGCTG AAAATAGTAAAGTAAGCGATATCTCGCCACTTGCTAGTTTATCTAGTCTTACAGAAGTTTACTTGAGAGAGAATCAAATT AGCGATGTGAGTCCCCTTGCGAATATTCCCAACTTATCTATTATTGAGTTGACGGATCAAATAATTACCAATCAACCCGT ATATTATCAAAATAAAATCATTGTTCCAAATGTGATAAAAGGCCTTTCCGGTGAGCTTATTGCACCTGATACTATTAGCG ACAATGGAGCATATACTAGTCCTGATTTAACGTGGGATTTAAACAGCTACATTAATAGTGTTAGTTACACATTTAATCAA TCAATTGCTTTCAAAAATACAACGGTTCCTTTCAGTGGAACAGTCACCCAACCATTAACAGAGGCTTACACTGCCGTTTT TGATGTGGACGGAGAGCAAACAAGTTTGACAGTAGTTGTGAATGAATTAATTGAAGAACCAACAGTTCCAACCAAGGAAG GATATACATTCGATGGCTGGTATGACGCAGAAACGAATGGGAATAAATGGGACTTTGCGGTAGATAAAATGCCTGCTAGT GATATAACTTTATATGCTAAGTTCACTGAGAACGAAGAACCAAATGCTAGTAGTTCAATTAATGTGGAACCAAACGATGA TAATTCCATCAATGTAGAACCCGACGCTAGCAATTCCATCACTGTAAAACCAACAGAAAATAACGATGGAACAAATAATC CGAACAGTTCAGGTGATGATAAAATTAACATCAAGTTACCAATTACTGGGGACGAATGGAATGTGCTTCCCATTTTTGTA GGAGCAGTTCTTATCGGAATGGGCTTAGTTTTATTCCGCAAAAAACGTCAAACAAAATAA Protein sequence : MKRNKVILRIVVTLAAVLAITFWVGMSSKEVEAAVIEQPTPINEIFTDPVVADNVKTLLEKADVTDEVTQTDLDSITQLS AKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEG LTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQI SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGAYTSPDLTWDLNSYINSVSYTFNQ SIAFKNTTVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVVNELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPAS DITLYAKFTENEEPNASSSINVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSGDDKINIKLPITGDEWNVLPIFV GAVLIGMGLVLFRKKRQTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 0.0 | 83 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 0.0 | 83 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 0.0 | 82 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 3e-128 | 69 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 2e-127 | 69 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 1e-127 | 69 |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 4e-101 | 51 |
