Gene Information

Name : LM1816_15592 (LM1816_15592)
Accession : YP_008288157.1
Strain : Listeria monocytogenes J1816
Genome accession: NC_021829
Putative virulence/resistance : Virulence
Product : PhoB family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2692485 - 2693165 bp
Length : 681 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAATAGAATATTAATCGTAGAAGATGAAAAAAACTTAGCACGCTTTATCGAACTCGAATTACAACATGAAAATTATGA
AACAGCGGTTGCTAATGATGGACGTGCTGGACTAGAACTCGCACTTAATGAAGAATGGGATGCTATTTTACTCGATCTAA
TGTTGCCGCATTTAAACGGTGTAGAAGTTTGTCGTCGTGTACGCCAAGTGAAACAAACACCCATTATTATGATAACCGCA
CGTGACTCAGTTATCGATCGTGTATCCGGACTGGATCACGGAGCAGATGATTACATCGTCAAACCCTTCGCTATTGAAGA
ATTACTTGCGCGCCTTCGCTCGCTATTGCGTCGGGTGGAAAATGCAGAACAATCTGCTAAACAAACAACGCTACAGTATC
GTAATCTAATTGTTGAAAAGGAAAATCGCATTGTCAAACGCGACGAAGAAATCATTGACTTAACAAAACGAGAGTATGAA
CTTTTACTTACGTTAATGGAAAATGTTAATATCGTTCTTACGCGGGAAGTGTTACTCAATAAAGTATGGGGTTATGAAAC
AGAAGTAGAAACAAATGTAGTGGATGTGTACGTTCGTTACTTACGAAATAAAATTGATCATCCTGACGAAGAAAGTTATA
TCCAAACAGTTCGCGGGACAGGGTATGTGATGCGTACATGA

Protein sequence : 
MNRILIVEDEKNLARFIELELQHENYETAVANDGRAGLELALNEEWDAILLDLMLPHLNGVEVCRRVRQVKQTPIIMITA
RDSVIDRVSGLDHGADDYIVKPFAIEELLARLRSLLRRVENAEQSAKQTTLQYRNLIVEKENRIVKRDEEIIDLTKREYE
LLLTLMENVNIVLTREVLLNKVWGYETEVETNVVDVYVRYLRNKIDHPDEESYIQTVRGTGYVMRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-31 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator HE999704.1.gene1528. Protein 3e-94 100
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator AE015929.1.gene1106. Protein 3e-47 56
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_003923.1003417.p0 Protein 3e-49 55
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_013450.8614146.p0 Protein 3e-49 55
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_002951.3238224.p0 Protein 3e-49 55
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_007793.3914065.p0 Protein 3e-49 55
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_002758.1121390.p0 Protein 3e-49 55
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_010079.5776364.p0 Protein 3e-49 55
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_002952.2859858.p0 Protein 3e-49 55
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_007622.3794948.p0 Protein 3e-49 55
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator BAC0308 Protein 2e-31 43
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator BAC0125 Protein 5e-31 42
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator NC_012469.1.7685629. Protein 7e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator VFG1390 Protein 6e-40 44
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator VFG1389 Protein 5e-32 43
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator VFG1563 Protein 2e-31 41
LM1816_15592 YP_008288157.1 PhoB family transcriptional regulator VFG1702 Protein 1e-31 41