|
Name : LM1816_01047 (LM1816_01047) Accession : YP_008287768.1 Strain : Listeria monocytogenes J1816 Genome accession: NC_021829 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 2236521 - 2237414 bp Length : 894 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGTTGAAAAAAAATAATTGGTTACAAAATGCAGTAATAGCAATGCTAGTGTTAATTGTAGGTCTGTGCATTAATACGGG TTCTGGGACAAAAGTACAAGCTGAGAGTATTCAACGACCAACGCCTATTAACCAAATTTTTCCAGATCCCGGCCTAGCGA ATGCAGTGAAACAAAATTTAGGAAAGCAAAGTGTTACAGACCTTGTATCACAAAAGGAACTATCTGGGGTACAAAATTTC AATGGAGATAATAGCAACATTAAATCTCTTGCCGGAATGCAATTTTTCACTAATTTAAAAGAACTTCATCTATCCCACAA TCAAATAAGTGACCTTAGTCCTTTAAATGATCTAACTAAATTAGAAGAGCTATCTATGAATAGAAATAGACTGAAAAATT TAAACGGAATTCCAAGTGCTTGTTTATCTCGTTTGTTTGTAGATAACAACGAACTCCGAGATACTGACTCGCTTATTCAT TTGAAAAATCTAGAAATCTTATCTATTCGTAATAATAAGCTAAAAAGTATTGTGATGCTTGGCTTTTTATCTAAACTAGA GGTATTAGATTTGCATGGTAATGAAATAACAAATACAGGTGGACTAACTAGATTGAAGAAAGTTAACTGGATAGATTTAA CTGGTCAGAAATGTGTGAATGAACCAGTAAGATACCAACCAGAATTGTATATAACAAATACTGTCAAAGACCCAGATGGA AGATGGATATCTCCATATTACATCAGTAATGGAGGGAATTATGTAGATGGTTGTGTCCTGTGGGAATTGCCTGTTTATAC AAATGAAGTAAGCTATAAGTTTAGCGAATATATAAACGTTGGGGAGACTGAGGCTATATTTGATGGAACAGTTATACAAC CTATTCAGAATTAG Protein sequence : MLKKNNWLQNAVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQIFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNF NGDNSNIKSLAGMQFFTNLKELHLSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTDSLIH LKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVKDPDG RWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlC | CAA68919.1 | internalin C | Virulence | Internalin | Protein | 9e-133 | 97 |
| i-inlC | CAA68917.1 | internalin C | Virulence | LIPI-2 | Protein | 8e-127 | 91 |
| i-inlK | CAC80807.1 | internalin K | Virulence | LIPI-2 | Protein | 2e-70 | 53 |
| i-inlD | CAA68916.1 | internalin D | Virulence | LIPI-2 | Protein | 6e-68 | 52 |
| i-inlF | CAI59953.1 | i-InlF protein | Virulence | LIPI-2 | Protein | 4e-71 | 50 |
| i-inlF | CAA71105.1 | i-InlF protein | Virulence | LIPI-2 | Protein | 4e-71 | 50 |
| i-inlF | CAA74581.1 | i-InlF protein | Virulence | LIPI-2 | Protein | 6e-64 | 49 |
| i-inlJ | CAC20607.1 | internalin J | Virulence | LIPI-2 | Protein | 2e-60 | 45 |
