Gene Information

Name : LM1816_11427 (LM1816_11427)
Accession : YP_008287709.1
Strain : Listeria monocytogenes J1816
Genome accession: NC_021829
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2173157 - 2174089 bp
Length : 933 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAAAAATAATAGTTGTAGCTCTTTTCGCATTAGTAGTTGTGCTTGCGGGGTGTTCCAGTCAAAATAGCGATTCGAA
AAAAACAGACGGCAAATTAAATGTCGTAGCCACCTATTCGATATTAGCAGATATTGTAAAAAATGTAGGCGGGGATAAAA
TTGAACTGCATAGTATTGTGCCTGTTGGCGTTGATCCACATGAATATGATCCCTTGCCAGCCAACATTCAAAGTGCTGCG
GATGCTGATTTAATCTTTTACAATGGATTGAATTTGGAAACAGGGAATGGTTGGTTTGATCGTATGTTAGAAACGGCGGA
TAAATCAAGAGACGACAAGGAGCAAGTGGTGGAGTTAAGTAAAGGTGTAAAACCCAAATACTTAACGGAAAAAGGCAAGA
CGTCTGAAACAGATCCACATGCATGGCTTGATCTTCATAACGGAATTATCTATACTGAAAATGTTCGTGATGCACTTGTA
AAAGCGGATCCAGACAATGCGGATTTTTATAAAGAGAATGCGAAAAAATATATCAACAAATTAGCTACTCTGGATAAAGA
AGCAAAACAAAAATTTGCAGATTTGCCAGAAAATCAAAAAACATTAGTAACTAGCGAAGGTGCCTTTAAATATTTTGCAG
CTCGCTACGGATTAAAAGCAGCATATATTTGGGAGATAAATACAGAAAGTCAAGGTACTCCAGACCAAATGAAACAAATT
GTCGGTATCGTGGAAAAAGAAAAAGTGCCTAATTTATTTGTCGAAACAAGCGTAGATCCACGTAGTATGGAAAGTGTATC
TAAAGAAACAGGCGTACCAATTTTCGCAAAAATCTTCACGGACTCCACTGCTAAAAAAGGTGAAGTGGGCGACACGTATT
TAGAAATGATGCAATACAATTTAGATAAAATTCATGATGGTTTAGCCAAATAA

Protein sequence :
MKKIIVVALFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILADIVKNVGGDKIELHSIVPVGVDPHEYDPLPANIQSAA
DADLIFYNGLNLETGNGWFDRMLETADKSRDDKEQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV
KADPDNADFYKENAKKYINKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQI
VGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEMMQYNLDKIHDGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 6e-78 55
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 4e-78 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM1816_11427 YP_008287709.1 manganese ABC transporter substrate-binding protein VFG2157 Protein 3e-134 99
LM1816_11427 YP_008287709.1 manganese ABC transporter substrate-binding protein VFG2165 Protein 4e-83 61
LM1816_11427 YP_008287709.1 manganese ABC transporter substrate-binding protein VFG1359 Protein 3e-78 54