Gene Information

Name : LM1816_08068 (LM1816_08068)
Accession : YP_008287377.1
Strain : Listeria monocytogenes J1816
Genome accession: NC_021829
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1809730 - 1810509 bp
Length : 780 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGAAGTAAGGGACGTTAATTTTAGTTATAATGGAACAGAGTCTACCTTAAAAAATGTCTCATTTACGATCCAGAAAAA
TAAAATCAATACGATTGTTGGGCCAAATGGTAGTGGGAAATCTACTTTATTAGAAATTTTGGCTAGACTTCTTTCGCCTG
ATTCTGGGGATGTTTTACTGGAAGGGAAATCGATTTTTGAATGGAAAGCAAAAGAATTTGCGCAAAATGTAGCGATTGTT
CATCAAAATAACGTTCTTCCGAATGAACTAACGGTGAAGGAATTGCTTTACTTTGGTCGTCTACCTTATAAAAATTGGCG
AATGACTCGGACGAAGGCGGATGATCTGGCTGTTGAGCAGGCTTTGATGCAAACGGAGCTAACTGAAAAAGCGGAGAAAT
TTGTTGATAGTCTTTCTGGAGGAGAGCGGCAGCGTGTTTTTATAGCAACAGCATTGGTTCAAGATACACCTATTTTGCTG
TTGGACGAGCCGACGACATTTCTGGACATGTATTTTCAACTAGAAATTTTAGAGTTAGTAAAACGGTTAAATCAAGAAAA
AAATTTGACTATTGTAATGATTTTGCATGACTTAAACCAAGCGTTGATGTATAGTGACCATTTGATTGTGATGAAAAATG
GGAAAGTGGTTGCAAAAGGAGTACCAGGAGAATTACTAACAACGGAGCTGATTGCTGAAACTTATGGTGTAGTTGCGAAG
GTTTTAAACGATGCGAACACTGGGAAATACATTGTTCCTCAAAAGCGAAAGGAGTTTTAA

Protein sequence : 
MEVRDVNFSYNGTESTLKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPDSGDVLLEGKSIFEWKAKEFAQNVAIV
HQNNVLPNELTVKELLYFGRLPYKNWRMTRTKADDLAVEQALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILL
LDEPTTFLDMYFQLEILELVKRLNQEKNLTIVMILHDLNQALMYSDHLIVMKNGKVVAKGVPGELLTTELIAETYGVVAK
VLNDANTGKYIVPQKRKEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-46 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-44 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-44 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-44 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-44 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-44 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-44 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-44 41
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM1816_08068 YP_008287377.1 iron ABC transporter ATP-binding protein BAC0164 Protein 4e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM1816_08068 YP_008287377.1 iron ABC transporter ATP-binding protein VFG0925 Protein 9e-45 44
LM1816_08068 YP_008287377.1 iron ABC transporter ATP-binding protein VFG1042 Protein 4e-42 41