Gene Information

Name : LM1816_16810 (LM1816_16810)
Accession : YP_008286779.1
Strain : Listeria monocytogenes J1816
Genome accession: NC_021829
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1218283 - 1218906 bp
Length : 624 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGATTGAATTAGTTAATGTCAGTAAAAAGATACAAGATAAATTGATTTTGGAAAAAGTCTCTCTTTCTATTGGAGCTGG
TGAATTTATTGCAGTCGTCGGCGAGAGTGGTAGTGGGAAGACCACGCTGCTGAATGTTATCGGACACCTAGATTCAAAAG
ATAGTGGGCAAGTTATTATTAACGAGATGGAATATCAGCCGAAAAAAGAGGTTATGACTCTAAAAAAAGAGGTGTTAGGT
TTTATATTCCAAAATTATCTATTGATGGAAAATGAAACAGTGTTAGAAAACTTATCCATTACAGGTGGAAAAAATCGCAA
GCTGATGATAGAGCATTTAGAAGAAGTAGGAATGGATGAAAGCTATTTAGCAAAAAAAGTATACCAATTAAGCGGTGGAG
AAAAACAACGGATTGCTATTGTGCGCATTTTACTCAAACCATTTCAGTTATTACTTGCGGACGAACCAACAGGCAACTTG
GATGATAAAAACAAACACAAAATCATTGAATTATTTTTAGCGTTGAAAAAACAAGGTAAAACAATCATTTGTGTCACACA
TGACCCAGAAATATCTGCAAAAGCAGATCGAATCATTTACATTGAAGGAGGCGAAATAAGATGA

Protein sequence : 
MIELVNVSKKIQDKLILEKVSLSIGAGEFIAVVGESGSGKTTLLNVIGHLDSKDSGQVIINEMEYQPKKEVMTLKKEVLG
FIFQNYLLMENETVLENLSITGGKNRKLMIEHLEEVGMDESYLAKKVYQLSGGEKQRIAIVRILLKPFQLLLADEPTGNL
DDKNKHKIIELFLALKKQGKTIICVTHDPEISAKADRIIYIEGGEIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM1816_16810 YP_008286779.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-29 42
LM1816_16810 YP_008286779.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-22 41
LM1816_16810 YP_008286779.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-31 41