Gene Information

Name : M644_09875 (M644_09875)
Accession : YP_008284564.1
Strain : Listeria monocytogenes J1817
Genome accession: NC_021827
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1959661 - 1960362 bp
Length : 702 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGACCTATGTAGAAATGAAAGATGTATCTAAATACTATCAAATGGGCGAGAACGTTGTCACGGCAAATGATAAAATCAC
TTTCGGGATAAAAAAGGGTGAATTTGTTGTAATAGTCGGACCTTCTGGAGCCGGAAAATCCACTGTACTTAATATACTTG
GTGGAATGGATAGTGCAAGTGAAGGCAAAATTATGGTAGATGGGCAGGATATTGCTCAATATAATGCAAAACAATTAACC
AAATATCGGCGAACAGATGTCGGCTTTGTATTTCAATTTTACAATTTGGTACCCAATTTGACTGCTAAAGAGAACGTAGA
ATTAGCTGCCCAAATTGCGCCAAATGCATTAGACGCAGAAACTGTTTTAACTCAAGTTGGATTAAGTCACAGATTAGACA
ATTTTCCAGCACAACTATCTGGCGGGGAACAACAGCGTGTCGCCATAGCACGTGCGCTTGCTAAAGCACCGAAACTGCTT
TTATGCGATGAGCCAACCGGGGCACTTGATTACGATACTGGAAAATCAGTCTTAAAATTATTACAAGAAACTTGCCGTAA
CACGGGAACAACCGTTATTGTTATTACCCATAACACAGCGATTACGCCAATTGCAGATCGAATTATTGAAATTAATAATG
CAAAAGTTCGCAGCATCAAAGAAAATCCAGAACCAATGTCGATTGATGATTTAGAATGGTAG

Protein sequence : 
MTYVEMKDVSKYYQMGENVVTANDKITFGIKKGEFVVIVGPSGAGKSTVLNILGGMDSASEGKIMVDGQDIAQYNAKQLT
KYRRTDVGFVFQFYNLVPNLTAKENVELAAQIAPNALDAETVLTQVGLSHRLDNFPAQLSGGEQQRVAIARALAKAPKLL
LCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAITPIADRIIEINNAKVRSIKENPEPMSIDDLEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M644_09875 YP_008284564.1 peptide ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 9e-67 64
M644_09875 YP_008284564.1 peptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-37 44
M644_09875 YP_008284564.1 peptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-38 42
M644_09875 YP_008284564.1 peptide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-29 41