Gene Information

Name : M638_13315 (M638_13315)
Accession : YP_008279273.1
Strain : Listeria monocytogenes J2-1091
Genome accession: NC_021825
Putative virulence/resistance : Virulence
Product : internalin F
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2626737 - 2629208 bp
Length : 2472 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAAGCGAAAAATAATTTTTTTAAACAATTAATTTCCATAATGACTGTCTTGAGCCTTTTGTTCATGGTATTAGGTAT
TCAGGGTAATAATGAGGTTAAAGCAGCAACTTTAGCCACGCTACCAGCCCCGATTAATCAAATTTTCCCAGATGCAGATT
TAGCAGAAGGAATACGAGCAGTGCTTCAAAAAGCAAGTGTCACAGATGTAGTGACACAAGAAGAATTAGAAAGCATTACG
AAATTAGTAGTAGCCGGGGAAAAAGTAGCCTCCATTCAAGGGATCGAGTATTTAACTAATTTGGAGTACTTAAACCTTAA
TGGAAACCAAATTACTGATATTAGCCCATTAAGTAATTTAGTTAAATTAACGAATCTGTATATTGGAACTAATAAAATCA
CTGATATTAGTGCCTTGCAAAACTTAACTAATTTAAGGGAGCTATATCTTAATGAAGATAATATTAGCGATATTAGTCCA
TTAGCAAATTTAACTAAAATGTATTCTTTGAATTTGGGGGCTAATCATAACCTCAGTGATTTAAGTCCGTTAAGCAATAT
GACAGGTTTGAATTATTTGACAGTCACGGAGTCTAAAGTAAAAGATGTGACACCAATAGCCAATTTAACCGACTTATATA
GTTTAAGTTTGAATTATAATCAAATTGAAGATATAAGTCCGCTAGCTAGTTTGACAAGTTTACATTATTTTACAGCATAT
GTGAATCAAATTACTGATATTACTCCTGTAGCTAATATGACAAGGCTAAATTCTTTAAAGATAGGAAATAATAAAATTAC
TGATTTAAGCCCATTAGCTAATCTATCACAATTAACTTGGCTAGAAATCGGTACCAATCAAATTAGCGATATTAATGCGG
TTAAAGATTTAACTAAATTAAAAATGTTGAATGTTGGTAGTAACCAAATTAGTGATATATCTGTTCTAAATAATCTTTCC
CAATTGAATTCTTTATTCTTGAATAATAATCAACTTGGGAATGAAGATATGGAAGTGATTGGTGGATTAACTAATTTAAC
TACTTTATTTTTATCGCAAAATCATATTACAGACATAAGACCATTAGCAAGTTTAAGTAAAATGGATTCCGCTGACTTTG
CAAATCAGGTGATAAAAAAACCAGCACGTAATTTTTCGAAGACATTATCTGTTCCGAATAATATAACTAGCATAGATGGA
ACACTAGTTACTCCTAAGACAATTAGCAATAATGGAACCTACGACGCGCCAAACGTGAATTGGTCTTCGCCGAGCTATCT
TCCAGAAGTAAGATATACATTCAAGCAAGATGTGGCGGTGGGATCAACCACAAGTAGTTATACTGGTATCATAATTCAAC
CGCTAAATGAGCCAGTAGACTACAATGTCACATTTAATATAGACGGCAATACAAGCGAAGTAAAAACTGTAACAGAAGAA
GATCTAATTCCAGAACCTGCGAACCCGACCAAACAAGGTTATACATTTGATGGTTGGTACGACGCCGAAACAGGTGGAAC
AAAATGGGACTTTACAACTGGGCAAATGCCTGCAAATGATCTCATGCTATATGCCCATTTTTCCGTAAATAGTTATCAAG
TGAATTTTGATATAGATGGCGCAGTAATGAATGAAGCGGTAGTATACGATACTTTGCTCAATGAACCGACCGCTCCAACC
AAACAAGGTTATACATTCGATGGTTGGTATGACGCAGAAACAGGCGGTAATAAGTGGGATTTCAAAACGATGAAAATGCC
CGCAAATGATGTTACTTTATATGCACATTTTACTGTCAGCAGTTACCAAGTGAATTTTGATATAGATGGTGCGGTAACGA
ATGAAGCAATAGTATACGATACCTTACTCAATGAACCGGCGACTCCAACTAAACAAGGTTATACATTTGATGGCTGGTAT
GACGCAGAAACAGGCGGTAATAAGTGGGATTTCAAAACAATGAAAATTCCCGCAAATGATGTCACTTTATATGCGCATTT
TACCATCAACAACTATCAAGCTAATTTTGATATAGATGGTTCGGTAACGAATGAAACGATAACATATGATACCTTACTTA
ATGAACCGACTGCTCCAACCAAACAAGGTTTCCTTTTCGATGGGTGGTATGACGCAGAAGTAGGCGGAACAAAATGGGAT
TTTAACACGATGAAAATGCCTGCGAACGATATTACTTTGTACGCACATTTCAGTAAAGAAACGCCACTTATTCCTAGCCC
ATCTGACGAATCAGACTCGAAACCTACCAATGGATCAATCACTATAAATGAACCGAGTGCAACTAGTATGCCAGTCCAAA
ATAATAACATCACAGTAACAGCAGGGGAAAATACTCCAGAACTAACAACAGCTAAACTTCCGAAAACTGGAGATAATAAC
CCGTGGCAAACACTATTCGCCGGGATATTACTTTCATCATCCGCGTTTTATATTTGGAGAAAAAAAGCATAA

Protein sequence :
MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATLPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESIT
KLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISP
LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY
VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNLS
QLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDG
TLVTPKTISNNGTYDAPNVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE
DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDGAVMNEAVVYDTLLNEPTAPT
KQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVSSYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWY
DAETGGNKWDFKTMKIPANDVTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD
FNTMKMPANDITLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPVQNNNITVTAGENTPELTTAKLPKTGDNN
PWQTLFAGILLSSSAFYIWRKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
inlF AAB67968.1 internalin Virulence Internalin Protein 0.0 74
inlA CAC20628.1 internalin A Virulence Internalin Protein 6e-136 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M638_13315 YP_008279273.1 internalin F VFG0075 Protein 3e-136 45