Gene Information

Name : M642_04010 (M642_04010)
Accession : YP_008271666.1
Strain : Listeria monocytogenes C1-387
Genome accession: NC_021823
Putative virulence/resistance : Unknown
Product : phage capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 743225 - 744376 bp
Length : 1152 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGACTATCAAATTAAAAAACAACCTCGCGAATTACGAGGAAAAACGGACAGCTTTTGTTAACGCTGTTAAAAACGAAGA
CACGCAAGAAATTCAAAATAAAGCATATGTGGAAATGGTAGACGCGATGGCAGCTGATATTATGGAACAAGCTAAGAAAG
AAGCACGTCAAGAAGCGGACGCATATATTTCAGCTAGCCGAACAGACAAAAATATCACGAATGAAGAAATTAAATTCTTC
AATGATATTAATAAAGAGGTTGGATATAAAGAAGAAACATTGCTACCACAAACAGTCGTTGATGAAATCTTTGAAGATTT
AACAACTGAGCATCCTTTCCTTGCATCTATTGGAATGCGCACGACTGGTTTGCGTACTAAGTTCTTAAAATCCGAAACAA
GCGGTCTTGCCGTGTGGGGTAATATTTTTGGTGAAATTAAAGGACAGCTAGATGCGACATTCAGTGAAGAAGAGTCTATT
CAAAACAAGCTAACGGCATTTGTTGTTGTGCCTAAAGACCTTGAAAAATTTGGTCCTGTTTGGGTAAAACGCTTTGTTGT
TACGCAAATTGAAGAAGCTTTTGCAGTTGCGTTAGAAAGTGCGTTTATCGTTGGTACTGGTAAATCTCAACCGATTGGTT
TAAATCGAAAAGTAGCTAAAGGGACATCAGTAACCGATGGTGTATATCCAGAAAAAGTTGCTTCTGGAACACTGACATTT
GCTAGTCCTAAAGTGACGGTTAATGAGTTAACAGATGTATATAAATATCACTCTGTAAAAGAAAACAAACATCCATTAAA
CGTTGCAGGTAAAGTTACTTTACTAGTCAATCCAACGGATGCATGGGATGTTAAGAAACAATACACAAGCTTAAATGCGA
ACGGTGTTTATGTGACTGCGCTCCCATACAATTTAAATATCATTGAATCATTATTCGTTCCAGAAAAGAAAGCTATTTCT
TACGTAGCAGAACGTTATGATGCACTTGTTGGTGGTCCATTGGATATTTCTACTTTTGACCAAACGCTTGCATTTGAAGA
CCTTAATTTATATGCTGCAAAACAATTTGCGTACGGTAAAGCGAAAGACGATAAAGCTTCTGCTGTATGGACATTAAATA
TCAAACCAGCAGAACAAACTCCGGAAGGGTGA

Protein sequence :
MTIKLKNNLANYEEKRTAFVNAVKNEDTQEIQNKAYVEMVDAMAADIMEQAKKEARQEADAYISASRTDKNITNEEIKFF
NDINKEVGYKEETLLPQTVVDEIFEDLTTEHPFLASIGMRTTGLRTKFLKSETSGLAVWGNIFGEIKGQLDATFSEEESI
QNKLTAFVVVPKDLEKFGPVWVKRFVVTQIEEAFAVALESAFIVGTGKSQPIGLNRKVAKGTSVTDGVYPEKVASGTLTF
ASPKVTVNELTDVYKYHSVKENKHPLNVAGKVTLLVNPTDAWDVKKQYTSLNANGVYVTALPYNLNIIESLFVPEKKAIS
YVAERYDALVGGPLDISTFDQTLAFEDLNLYAAKQFAYGKAKDDKASAVWTLNIKPAEQTPEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1963 NP_372487.1 hypothetical protein Not tested ¥ÕSa3 Protein 9e-108 57
SA1774 NP_375072.1 hypothetical protein Not tested ¥ÕSa3 Protein 9e-108 57
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 9e-108 57
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 9e-108 57
SAOV_1104 YP_005736599.1 Phage major capsid protein Not tested ¥ÕSa2 Protein 2e-107 57
SAKOR_01942 YP_008492130.1 Major capsid protein Not tested ¥ÕSa3 Protein 9e-108 57
SH1772 YP_253687.1 hypothetical protein Not tested ¥ÕSh1 Protein 3e-93 52