Gene Information

Name : M642_02970 (M642_02970)
Accession : YP_008271459.1
Strain : Listeria monocytogenes C1-387
Genome accession: NC_021823
Putative virulence/resistance : Resistance
Product : DeoR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 562050 - 562712 bp
Length : 663 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGAAAAAATACTCATTGCAGAAGATGATTCAGCTATTTTAGGAGTTATTACAGCATTCTTAACCGAAGCAGGGTATCA
AGTAATGACAGCTAAAAATGGAATAGAAGCATATCATCTATTTCAAAAGGAAACATTTGATTTAATTATTATGGATATTA
TGATGCCGAGTATGGACGGGTACACACTAACAGAACTGATTCGTTCTACTTCAACCACACCGATACTTATGATGACGGCG
CTCTCCGAAGAAGATGACGAGTTGAAAGGCTTTGATCTAGGGGCGGACGACTATATACAAAAACCATTCTCTTATTTAGT
ATTATTAAAACGAGTGCAAGTACTTTTGAGACGAGTGAACCAAAGTGAAACAAAGAAGCAAATACTACGATGCGGAAATA
TTTCTGTAGATACCGAAACCTTTGAAGTGATTTCAGCTGGAGAAACAATCGAATTAACGAAAAAAGAATTTGATATTTTA
GTACTCCTGATTAAAAATCAAAAGAAGGTGATTACTCGTGAAATGATATTGTCGCAAGCATGGGATTTCGCAGCTATTGT
GGATACGTCCATTATCAATACGCATATGAAAAATCTACGCAAAAAACTGCACACTGAAAAAATTCAAACGATTAGAGGTG
CTGGCTATAAAATGGATGAATAA

Protein sequence : 
MEKILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYTLTELIRSTSTTPILMMTA
LSEEDDELKGFDLGADDYIQKPFSYLVLLKRVQVLLRRVNQSETKKQILRCGNISVDTETFEVISAGETIELTKKEFDIL
VLLIKNQKKVITREMILSQAWDFAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-42 42
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 2e-30 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M642_02970 YP_008271459.1 DeoR family transcriptional regulator HE999704.1.gene1202. Protein 2e-91 100
M642_02970 YP_008271459.1 DeoR family transcriptional regulator AF310956.2.orf0.gene Protein 1e-42 42
M642_02970 YP_008271459.1 DeoR family transcriptional regulator AE016830.1.gene2255. Protein 4e-40 41
M642_02970 YP_008271459.1 DeoR family transcriptional regulator U35369.1.gene1.p01 Protein 4e-40 41
M642_02970 YP_008271459.1 DeoR family transcriptional regulator BAC0347 Protein 3e-28 41