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Name : gabD (M642_02230) Accession : YP_008271312.1 Strain : Listeria monocytogenes C1-387 Genome accession: NC_021823 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 423774 - 425240 bp Length : 1467 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : TTGAGTATTAAAGAAACAGCATTACCAAAAGTTCAAACAAAATTATTTATTAATGGAAAATGGACGGATGGAGATAATAA AGAAACAAAAGATATTGTAAATCCAGCAAACGGAGATGTTATTGCAAAAATCGCTCAAGCTGGACCAAGTGAAACAAAAA AAGCTATTAAAGCGGCAAAAGATGCATTTCCTGATTGGGCAAAAATGGAACTAGCTGACCGTGTCAAATTATTACACAAA ATTGCCGATTTAATGGAAGAAAAAGCAGATACGTTAGCAAAAATTATGACGCTTGAACAAGGTAAACCGCTAAAAGAATC AAAAGGAGAAGTCTTAACTGGCGTAGAAAACTTCCGATTCGCTGCGGAAGAAGCAAGAAGATTATATGGTGAAACAATCC CTGCTCCAAACAATCATGCGTTTATCGTGAAAAAACAACCAATTGGCGTAGTTGCTGCTATTACTCCTTGGAATTTCCCA GGTGGTATGGTGACGCGGAAACTTGCACCGGCGCTTGCAACTGGGAATACAATTGTATTAAAACCTTCTGGAGATACGCC GCTTTCGGCTCTAGCTATTTTTGAAATTTTTGAAGAAGCTGGCTTGCCAAAAGGCGTTGCAAATATCGTTATGGGTAGCT CCAAAGAAATCGGTGAAACGTTAACTGATAGTGATGATGTTCGTAAACTAACTTTCACTGGTTCCACGAAAGTTGGTCAA ACACTCTTTAAACAATCAGCCGATACACTGAAAAAAATCTCACTCGAACTTGGTGGTCATGCGCCATTTATCGTATTTGA TGATGCGAACCTGGATGCTGCTGTAAATGATTTAGTTGCAGCGAAATTCCGCAATAACGGTCAAGTATGTGTATCGCCAA ACCGAATTTTTGTTGACAAAGAAATTAAAGAAAAATTCACTAAGGCGCTAGTTGCGAAAGTAGAACAACTAAAAGTAGGT AACGGTTTAGATGATGTGAACGTTGGTCCACTTATCCGCGAAGATGCGATTGACAAAATCGACAAACAACTTAAAAATGC CACAGATAAAGGTGCCAAAGTCTTAACTGGTGGCGGCCGTTTAACAGGTTCCGACTATGACAAAGGGAACTTCTACAAAC CAACTGTCTTAGATAACGTTACCCGTAAAATGGATATTTTCTACGAAGAAACATTTGGTCCAGTAATCCCGCTCATCACA TTTGAAACGGAAGACGAAGCAATCGAAATGGCGAATGACAGCGAATTTGGTCTTGCTTCATACTTCTATACAAAAGACTT AGCTCGCGTAGAAAAAGTAGGTGCGGCATTAGAATATGGTATGGTAGGTGCAAACGAAATTGCGATTTCTAACCCAGAAA CCCCATTTGGCGGTGTTAAACATTCTGGTTTCGGTCGCGAAAACGGCCACTACGGTATGGAAGAATACATCCAAGTGAAA TTCATTAACTTAAAATATCGTGACTAA Protein sequence : MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGDVIAKIAQAGPSETKKAIKAAKDAFPDWAKMELADRVKLLHK IADLMEEKADTLAKIMTLEQGKPLKESKGEVLTGVENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ TLFKQSADTLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRIFVDKEIKEKFTKALVAKVEQLKVG NGLDDVNVGPLIREDAIDKIDKQLKNATDKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTRKMDIFYEETFGPVIPLIT FETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK FINLKYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-106 | 52 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-79 | 41 |
