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Name : M642_14005 (M642_14005) Accession : YP_008273580.1 Strain : Listeria monocytogenes C1-387 Genome accession: NC_021823 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 2726288 - 2727787 bp Length : 1500 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAAAGAAACAAAACAGCATTAAGAATCTTAGTCACTTTAGCTGTAGTATTGGCAATTACTTTTTGGGTAGGGATGAG CTCAAAAGAAGTACAAGCAGCGGTGATTGAACACCCAACCCCTATTAACGAAATTTTTACTGATCCAGTGCTTACTGATA ATGTAAAAACACTGCTCGGAAAAGCGGATGTAACAGACGAAGTTACGCAAACCGACTTAGATAGTGTAACTCATTTATCA GCAAAATCAGCAGGAATAACAACAATAGAAGGATTGCAGTATCTAACTAATTTATCGGAATTAGAATTAATAGATAATCA AGTAACCGATTTAAATCCTCTTACTAATTTAACGAAAATAACAGAACTTAGATTATCTGGAAATCCGTTAAAAGATGTGA GCGCGCTTGCTGGATTAAAAAATCTAAAAACGATGGATCTTATTTATACAGATATTACGGATGTGACACCACTTGCAGGA CTTTCCAATTTACAGGTGTTAAATTTAGATATCAATCAAATAACTGATATAACTCCACTTGCTGGACTATCTAATTTACA ATTTTTATCGTTCGGAAGTACTCAAGTAAGTGATTTGACGCCACTTGCTAATTTATCTAAACTAACCACACTAAACGCTA TGAATAGTAAAGTAAGCGATGTTTCTCCACTTACTGGTTTATCTAATCTCACAGAAGTTTATTTGGAAGAGAATCAAATT AGTGATGTGAGTCCGCTTGCAAAATTACCCAACTTATCTATTGTTACTTTAACGAATCAAACAATCACCAACCAACCCGT ATTTTATCAAAATAAACCTATCGTTCCTAATGTAGTAACTGGCCTTTCTGGTGAGCTTATTGCACCGGATACTATTAGCG ACAATGGAACATACACTAGTCCCAATTTAACGTGGGATTTAAACAGCTTCATTAATAGTGTTAGTTACACATTTAACCAA TCAGTCACTTTCAAAAATACAACGGCTCCTTTTAGTGGAACAGTTACACAACCATTAACAGAAGTTTACGCTGTAGTTTT TGATGTGGACGGAGAGCAAACAAGTGCGATGGTAGGTGTGAATGAATTAATTAACGAACCAACTGCTCCAGCCAAGGAAG GTTATATATTCGATGGATGGTATGACGCAAAAACAGACGGGAATAAATGGGACTTTGGGATAGATAAAATGCCTGCTAGT GATATAACTTTATATGCTAAGTTCACTGAGAACGAAGAACCAAATGCTAGTAGTCCAATTAATGTGGAACCAAATGACAA TAATTCAGACAATGCAGAACCAAATGCTAGTAGTTCAATTAATGTACAAGAAAATGGAACTAACGAAGGAATAAATAATC TGAACAGTTCAGGTGAAGATAAAGTCAACATCAAGTTACCGATTACTGGGGATGAATTGAATGTGCTTCCTATTTTTGTA GGAGCAGTTCTTATCGGAATTGGCTTAGTTTTATTCCGCAAAAAACGTCAAACAAAATAA Protein sequence : MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLGKADVTDEVTQTDLDSVTHLS AKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAG LSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQ SVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPAS DITLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSINVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV GAVLIGIGLVLFRKKRQTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 0.0 | 99 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 0.0 | 99 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 0.0 | 99 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 2e-130 | 70 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 3e-131 | 70 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 3e-131 | 70 |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 3e-105 | 52 |
