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Name : M642_13995 (M642_13995) Accession : YP_008273578.1 Strain : Listeria monocytogenes C1-387 Genome accession: NC_021823 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 2722523 - 2724169 bp Length : 1647 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAAAAACGATGGAATTCTGTACTTAAAATTGTTTTAATGGTAACTGCTATTCTCAGTATAAGTCTATATGTAACGAC AAGCCAAGGTGTGGAGGTTCGGGCAGAGAGCATCACGCAGCCAACCGCAATTAATGTGATTTTCCCTGATCCAGCTCTTG CAAATGCAATTAAAATAGCGGCTGGAAAATCTAATGTAACAGATACTGTCACGCAAGCGGATTTAGATGGAATAACTACT TTATCAGCATTTGGGACTGGAGTAACAACGATAGAAGGAGTGCAGTACTTAAATAATTTGATAGGGTTAGAACTTAAAGA TAACCAAATAACTGATTTAACTCCTCTTAAAAATTTAACGAAAATAACAGAACTTGAATTATCTGGAAACCCGTTAAAAA ATGTGAGCGCGATTGCTGGGTTACAAAGCATAAAAACGCTAGACCTAACTTCTACGCAAATTACAGATGTGACCCCACTT GCAGGTCTTTCCAATTTGCAGGTATTATATTTGGATCTCAATCAAATAACCAATATAAGCCCGCTTGCAGGACTAACTAA TTTACAATACTTATCAATCGGAAATGCCCAAGTAAGTGATTTAACCCCACTTGCTAATTTATCTAAACTAACTACTTTAA AAGCTGATGATAATAAAATAAGTGATATTTCGCCACTTGCTAGTTTACCTAATCTTATAGAAGTTCATTTGAAAAATAAT CAAATTAGTGATGTTAGCCCACTTGCGAATACTTCAAACTTATTTATTGTCACTTTAACGAATCAAACAATTACCAACCA ACCTGTGTTTTATCAAAATAATCTTGTCGTCCCTAATGTAGTAAAAGGCCCTTCTGGCGCGCCTATTGCACCCGCTACTA TTAGTGACAATGGAATATACGCAAGCCCAAATTTAACATGGAATTTAACTAGTTTTATTAATAATGTTAGTTATACTTTT AACCAATCAGTCACTTTCAAAAATACAACAGTTCCGTTTAGTGGGACAGTTACACAACCATTAACAGAAGCTTACACTGC GGTTTTTGACGTGGACGGGAAGCAAACAAGTGTGACAGTCGGCGCGAATGAATTAATTAAAGAACCAACGGCCCCGACGA AAGAAGGTTACACATTCACAGGCTGGTATGATGCAAAAATTGGCGGGAATAAATGGGATTTCGGCGTGGATAAAATGCCC GCAGAAAATATCACGTTGTATGCTCAGTTCACAATTAATAGCTATACTGCCTCATTTGACAATGATGGTAAATTAACGAC TCAAAAAGTCACTTATCAAAGTCTATTAGAAGAACCAGCAGCGCCAACGAAAACAGGTTATACGTTCAAAGGTTGGTATG ATGCAAAAACGGGTGGAAATAAATGGGATTTTGCTACTGGTAAAATGCCGGCGGGAAATATTACACTATATGCCCAATTT ACTAAAAATGATAGCCCAAATCCAAATGATCCAACCCCTAATACCCCAACAGGAAATGGTGATGGTACAAGCAATCCAAG CAATTCAGGAGGCAATACCACACTTCCAACAGCTGGTGACGAAAATACCATGCTTCCGATTTTTATCGGGGTTTTCTTGC TAGGAACAGCAACGCTAATTCTCCGCAAAACAATCAAAGTGAAATAA Protein sequence : MKKRWNSVLKIVLMVTAILSISLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAAGKSNVTDTVTQADLDGITT LSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPL AGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNN QISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGIYASPNLTWNLTSFINNVSYTF NQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKIGGNKWDFGVDKMP AENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKGWYDAKTGGNKWDFATGKMPAGNITLYAQF TKNDSPNPNDPTPNTPTGNGDGTSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 0.0 | 99 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 0.0 | 97 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 0.0 | 97 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 4e-131 | 70 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 2e-131 | 70 |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 4e-132 | 70 |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 8e-148 | 60 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 3e-99 | 49 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 1e-99 | 49 |
