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Name : M642_13990 (M642_13990) Accession : YP_008273577.1 Strain : Listeria monocytogenes C1-387 Genome accession: NC_021823 Putative virulence/resistance : Virulence Product : internalin Function : - COG functional category : - COG ID : - EC number : - Position : 2720916 - 2722388 bp Length : 1473 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAACAGAGAAAAACCTCAGTACTACATGTTTTACTTGTAGTGACAGCTATCTTGGGAATTAGTTTATGGGTAAATGC AAGTCATGGGATGAAAGCTCAGGCAGAGAGTATTGCGCAACCAGCGCCAATTAACGAAATTTTCACGGATCCAGCATTAG CGGACGAGGTGAAGACGGAACTTGGAAAAACTAGTGTCACTGATGAAGTTACGCAAACAGATTTGAATCAGATAACTAAA CTTGAAGCAGACGACAAAGGAATAAATTCAATAGAGGGAATACAATATTTAACTAATTTGAATATGTTGGGTGTATCTTC CAATCAGATTACTAATATTACACCTCTTGCCAATCTTACTAATTTAGATTCTTTATATTTAGGAGATAATAAAATTAGTG ATGTGACGCCACTTTCAGGATTGACACAGTTAACATTCGTACAATTATCTATCAATCAAATAAAAGATGTGACACCTCTT GCTAATCTAACGAAATTAAATTATTTAGATTTACGAGAAAATCAAATAAGTGATGCAAGTCCTTTAGTTAATATGACTGA TTTAACGGTTTTACATTTAGAAAAACAACAAATAACAGCCGCGCCAGTCGTATATCAAACTAATTTAGTTGCACCAGATA TTTTGAAAAATGCTTATGGTGAAGTAGTACCACCAACAACGATTAGTAATAACGGAACCTTTGCTAGTCCAAATATCATT TGGAACTTAGATAGTTTCACGAGTGAGGTTAGTTATGATTTTAATCAAAAAATCACACTAGGTGATAATGGGAAGGTAAC TTTTGCAGGAACTGTTGTTCAACCGATAGTAGAAGCGCCCGTGAATTACATTACTACATTTGATGTGGATGGAACGACGA CGACAGAAAACGTGGTAGTGGATACATTAATAACCGAACCTGCTGAACCGACAAAAGAAGGTTATACTTTTTCTGGTTGG TATGATGCGGAAACTGGTGGGAATGAATGGGATTTTGCAGTAGATAAAATGCCGGCTACGAATATGACACTTTACGCACA GTTCACGATAAACAGCTACACAGCGACATTTGATGTGGATGGTGAAACAACTAATCAAAAAGTAGATTACCAAGCTCTGC TACAAGAACCGACTGCTCCGACGAAAGATGGCTACACATTTGTAGGATGGTATGATGCAAAAACGGGTGGAACTGAATGG GATTTCGCAACTAGCAAAATGCCAACTAGTGATATAACTTTATATGCTAGATTTACTAAAAATCCTAGCTCAGACAATTC TCAAACAGCTCCCGGAAAAGATGATAAAAACGACAAAGATAAACTAACAATTAAAGCTAACGACAGCGCAGATGCGACGA GTACTAAACTTCCAAAAACAAGTGATGATTCAAGTATGATTCCTACTATTTTAGGAACGCTTTTCATCGGAGGTGCAATA CTAATCTTACGAAAAAAAACTACTAACATTTAA Protein sequence : MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITK LEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPL ANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNII WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGW YDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEW DFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI LILRKKTTNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 0.0 | 99 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 0.0 | 99 |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 2e-94 | 51 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 5e-112 | 49 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 2e-113 | 49 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 2e-113 | 49 |
