Name : lysS (M642_13725) Accession : YP_008273539.1 Strain : Listeria monocytogenes C1-387 Genome accession: NC_021823 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2668333 - 2669829 bp Length : 1497 bp Strand : + Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGAGTAACGAGAATCATGAAGAACTAAATGACCAACTCATCGTCCGTCGTGAAAAAGTGGACACATTGCGCGAAGAAGG CATAGATCCTTTTGGCGAAAAATTCATCCGTTCCATCAGCCCGGAAGAAATCGAAACAAAATTCGCTGATAAATCAAAAG AAGAACTTGAAGAAGCTGCTATTGAAGTTTCTGTAGCAGGTCGTATTATGACAAAGCGTGTAAAGGGTAAGGTAGGTTTC ACACATATTCAAGACCGTTTCCATCAATTACAAATCTATATCCGTAAAGATGCGATTGGCGAAGATGCTTACGCAGTCTT CAAATTAGCGGATCTAGGTGACATTATTGGTATAAAAGGAACTATTTTCCGTACTAATACAGGTGAACTTTCTGTTAAAG CAACGGAATTCACTTTGCTTTCCAAATCGTTACGTCCACTTCCTGATAAATATCATGGTTTAAAAGACGTAGAACAACGC TATCGTCAACGCTATTTAGACTTAATCACAAACGAAGAAAGTCAAAATCGCTTTGTGATGCGCAGTAAAATCTTGAAATA CACTCGTGATTATATGGATAACCAAGGATTCTTAGAAGTAGAAACTCCGGTGCTTCATACAATTGCTGGTGGTGCTGCTG CAAAACCATTTATCACGCACCATAATGCGCTTGATATGGAATTATACTTACGAATCGCTTTAGAACTACACTTAAAACGT CTAATCGTTGGTGGGATGGATAAAGTGTACGAAATTGGCCGTGTTTTCCGTAATGAAGGAACATCCACGCGTCATAACCC AGAATTTACAATGCTAGAATCCTATGCAGCATACGAAGATTATGAAGATGTTATGGATCTGGTAGAAGGTTTAGTATCCA CGGTATGTAAACAAGTAAATGGAACAACAGAAATAACATACGGTGAATACAAAGTAGATTTAACTCCTAACTGGCGCCGA ATCCACATGGCAGATGCTGTAAAAGAATACGTAGGAGTGGATTTTTGGAACGTAACTTCCGATGAAGAAGCGCGTGAACT AGCAAAAAAACATGATGTGCCAGTAACGGAACACATGACATACGGGCACATTCTTAATGAGTTTTTCGAAACATACGTAG AAGAAAAGCTCATTCAACCAACTTTTGTTTACGGGCATCCGGTGGAAATTTCCCCATTAGCGAAGAAAAACAAAGAAGAT GAACGTTTTACTGACCGTTTTGAATTATTTATCGTTGGTCGTGAACATGCAAATGCATTCTCAGAATTAAACGATCCAAT TGATCAAAGAGAACGCTTTGAAGCGCAAATGAAAGAACGTGAGCAAGGTAATGATGAAGCACACGGAATGGATGCAGATT TCCTTGAAGCTTTAGAATACGGTCTACCGCCAACTGGTGGACTTGGAATAGGTATTGATCGTCTAGTAATGCTATTAACA GATGCCCCGTCTATTCGTGATATCCTATTATTCCCAACTATGAAACACCGCGACTAA Protein sequence : MSNENHEELNDQLIVRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSKEELEEAAIEVSVAGRIMTKRVKGKVGF THIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDIIGIKGTIFRTNTGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQR YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKR LIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWRR IHMADAVKEYVGVDFWNVTSDEEARELAKKHDVPVTEHMTYGHILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKED ERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLT DAPSIRDILLFPTMKHRD |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-105 | 48 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
lysS | YP_008273539.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-105 | 48 |