Gene Information

Name : M642_13590 (M642_13590)
Accession : YP_008273513.1
Strain : Listeria monocytogenes C1-387
Genome accession: NC_021823
Putative virulence/resistance : Virulence
Product : 1-phosphatidylinositol phosphodiesterase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2637433 - 2638386 bp
Length : 954 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
TTGTATAAGAATTATTTGCAACGCACATTAGTTTTATTGCTCTGTTTTGTTTTATACTTTTTTACTTTCCCATTAGGCGG
AAAAGCATATTCGCTTAATAACTGGAATAAACCTATTAAGAACTCTGTAACTACAAAACAATGGATGTCCGCTCTACCTG
ACACAACAAACCTAGCAGCGCTCTCTATACCAGGTACACATGATACGATGAGCTATAACGGAGACATAACATGGACATTA
ACCAAACCATTAGCTCAAACACAAACGATGTCACTGTACCAACAACTAGAAGCAGGAATACGGTACATCGATATTAGAGC
AAAAGACAATCTCAACATTTACCATGGGCCAATTTATTTAAATGCATCACTTTCAGGTGTATTAGAAACGATTACTCAAT
TTTTAAAGAAAAATCCAAAAGAAACCATTATTATGCGTTTAAAAGACGAGCAAAACAGCAACGATAGTTTTGATTATCGG
ATCCAACCACTAATCAACATTTATAAAGATTATTTTTACACTACTCCCAGAACTGACACGAGCAATAAAATCCCTACATT
AAAAGATGTCCGCGGAAAAATATTATTACTTTCAGAGAACCACACAAAAAAGCCATTAGTCATTAACTCACGCAAATTCG
GCATGCAGTTCGGCGCACCTAACCAAGTAATTCAAGATGACTACAATGGCCCGAGTGTGAAAACAAAATTCAAAGAGATT
GTCCAGACTGCTTATCAAGCTTCCAAAGCGGACAATAAACTTTTTCTTAACCATATTAGCGCCACTTCATTAACTTTCAC
ACCTCGTCAGTATGCTGCAGCATTAAACAACAAAGTAGAGCAATTCGTACTCAACTTAACATCGGAAAAAGTTCGAGGAT
TAGGCATACTAATCATGGACTTCCCCGAAAAACAAACAATTAAAAACATCATAAAAAACAATAAATTCAACTAA

Protein sequence : 
MYKNYLQRTLVLLLCFVLYFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSYNGDITWTL
TKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLNIYHGPIYLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYR
IQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEI
VQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
plc AAA69526.1 phosphotidyl inositol-specific phospholipase C Virulence LIPI-1 Protein 3e-129 98
plcA CAA51230.1 1-phosphatidylinositol phosphodiesterase Virulence LIPI-1 Protein 2e-95 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M642_13590 YP_008273513.1 1-phosphatidylinositol phosphodiesterase VFG0073 Protein 2e-130 99