|
Name : M642_12030 (M642_12030) Accession : YP_008273204.1 Strain : Listeria monocytogenes C1-387 Genome accession: NC_021823 Putative virulence/resistance : Unknown Product : seryl-tRNA synthase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 2314334 - 2315617 bp Length : 1284 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction met DNA sequence : ATGTTAGATGTTAAATTGTTACGTAATAATTTTGATGAAGTAAAGCAGAAATTACAAAATCGTGGGGAAGATTTGGGTGA ATTCGAGAAATTTGGCGAGTTAGATAAACGCCGTCGTACACTGATTGTCGAAACAGAAGCGTTGAAAAGTCAGCGTAATG AAGTATCTCAAGAAATCGCTAAATTAAAACGCGAAAAACAAGACGCGGACGCTAAAATTGAGGAAATGCGTGTCGTTGGT GATCGAATTAAAACATTAGATATCGAACTACGCGAAATTGATGAAAAATTAGATATGATTTTAATGTCGATTCCAAACAT TCCGCACGAATCTACTCCGGTTGGTGAATCGGAAGACGATAACGTGGAAATCCGTAAATGGGGAGAAGTTCGCGCATTTG ATTTTGAACCAAAAGCGCATTGGGATTTAGGAACAGATTTAGATATCCTTGATTTCGAAAATGCTGCGAAAGTAACTGGT AGCCGTTTTGTCTTTTATAAAAAATTAGGTGCGAGACTGGAACGTGCGCTTATTAACTTTATGATGGACTTGCATTCGAA CGAACATGGTTATGAAGAAATGTTACCGCCATACATGGTAAACCGTGCGAGCATGACAGGAACTGGTCAATTGCCGAAAT TTGAAGAGGATGCCTTCTTAATCGAAGCGGAAGATTATTTCCTTATTCCAACAGCGGAAGTGCCAGTAACCAACTACCAC CGCGAAGACATTTTAAAAGCAGAAGATTTACCAAGAAAATATACAGCATTTAGCGCATGTTTCCGTTCTGAAGCGGGATC TGCTGGTCGTGATACGCGTGGCTTAATCCGCCAACATCAATTTAACAAAGTGGAATTAGTTCAATTTGTGAAACCGGAAG ATTCCTACGCGGCGCTTGAAAAACTAACTGGTAATGCAGAAGAAGTATTGCGTCGTCTAGAATTACCATACCGCGTACTA AGCATGTGTACGGCTGATTTAGGCTTCACTGCTGCTAAAAAATATGATTTAGAAGTATGGATTCCGAGCTACAATTCTTA CCGTGAGATTTCTTCTTGCAGTAATTTTGAAAGTTTCCAAGCAAGACGCGCTAACATCCGTTTCCGTCGTGAACCAGGAA GCAAACCAGAATACGTGCACACATTAAATGGATCTGGCTTAGCTTTAGGTCGTACAGTTGCTGCCATTTTAGAAAACTAC CAAGATGCAGATGGTTCTGTACGCATTCCGAAAGTGTTGCAAGGTTATATGGGCGGCGTTGAGAAAATAGAATTACCAAA ATAA Protein sequence : MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIAKLKREKQDADAKIEEMRVVG DRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTG SRFVFYKKLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTNYH REDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVL SMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENY QDADGSVRIPKVLQGYMGGVEKIELPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-130 | 62 |
