Gene Information

Name : M642_11130 (M642_11130)
Accession : YP_008273035.1
Strain : Listeria monocytogenes C1-387
Genome accession: NC_021823
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2152835 - 2153503 bp
Length : 669 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGACTTTAATGATGAAAAATATTTCTAAAAATTATCAAGATGGCGAGCAAGTCATCGAAGTGTTGAAAAATGTATCTTT
AGAAGTAGCGCAAGGAGAATTCGTTGCAATCGTTGGACCTTCAGGCGCTGGGAAAAGTACATTTTTATCCATCGCAGGTG
CATTATTATCCCCAACAGAAGGAGAAATTGCTATAGGTGGAAAAGTGTTAAATGACCTCACAAGCAAAGACTTAACAAAA
GTGCGGCTCGACAAAGTAGGGTTCATTTTCCAAGGTGCGAACCTAATCCCGTACTTAAATGTCCGTGATCAGTTACTCGT
AATTGCGGAACTATCTGGTGATAAAGGGCGAGTAGCAAAAGAAAAAGCAGATGAATTACTTAAAGAATTAGGTTTAACTG
CTCGCGAAAACAATTATCCGGAAAGTTTATCGGGTGGTGAAAAACAACGTGTCGCCATTGCTAGAGCACTAATGAACGAC
CCCGATATTATTTTAGCGGACGAACCAACCGCAAGCTTAGATGCGAGCCGTGGTCACAAAGTAGTCCAAATGATTGCGGA
TGAAGTAAAACGAAAAAACAAAGCTGCCATCATGGTTACGCATGATGAACGAGTTTTAGACTTAGTTGACCGCGTAATTC
GGATTGAAGATGGCTATTTGAAGGATTAA

Protein sequence : 
MTLMMKNISKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKDLTK
VRLDKVGFIFQGANLIPYLNVRDQLLVIAELSGDKGRVAKEKADELLKELGLTARENNYPESLSGGEKQRVAIARALMND
PDIILADEPTASLDASRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDGYLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 9e-43 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 8e-49 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M642_11130 YP_008273035.1 peptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-40 46
M642_11130 YP_008273035.1 peptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-37 43
M642_11130 YP_008273035.1 peptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-36 41