Gene Information

Name : M642_10340 (M642_10340)
Accession : YP_008272878.1
Strain : Listeria monocytogenes C1-387
Genome accession: NC_021823
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1990330 - 1991340 bp
Length : 1011 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGACAACTGTGAAGGCGCATGATCCGCGGCGAAAACGTAGACGGATAACTTTTATTGTAGTAATCATTTTACTTATTTT
AGCTTTTTTCTACGGACTGACAACTGGGTCCGTGAAAATTACATATAGTGACGCTTGGCAGACGCTAACTGGCGGGGGAA
GCGACCTAGCGAACCAATTGATTTGGAACTTGCGCTTGCCTCGGTTATTAATTGCTTTCTTAGTAGGAGCGGCGCTGGCG
ATTGCTGGATGCTTGCTGCAAGGCGTGATGCGGAATCCATTAGCTGACCCAGGCGTAATTGGGGTTTCAGCCGGTGGTGG
CTTCGTGGCCATTTTAATGACATTAGCATTTCCTGCGTTAGCTTCCTTTGTGCCGATTGGTGCGTTTTTAGGGGCGTTTG
GAACAGCTATTTTGATTTATTTGCTTGCATGGGATCGCGGTGTTTCGCCTTTACGCGTAATTTTGTCGGGGGTAGCGATT
AATGCGTTTATTGGAGCGATGACTTCTGGCGTAATGGTGCTTTATAGCAACCGGGTCCAAAGTGTCATTTCTTGGATGAC
AGGAACGCTCTCCGGGAAAAGTTGGTATCATTTGGATATGATTTGGCCGTATATGCTGGTCGGGTTTGTTTTAAGTGGTT
TTGCGATTCGTTCTTCTAATGTATTGCTACTTGGGGACGATGCGGCGAAATTACTTGGCTTTTCTGTTGAACGGCATCGC
TTTTTTATTATTATGTTGGCGGCCTTTCTCAGTGGTGTTGCGGTTAGTGTAGCTGGACTTATTGGCTTTGTTGGACTTGT
CGTGCCACATATTTTCCGTTTGATCATTGGAAATGACTATAAATATTTACTACCATTATCCGCACTCGGCGGGGCTTTAT
TAGTTGGCTTTGCTGATACAGCAGCTAGAAGTTGGTTCGGATCCATCGAGCTTCCAGTTGGAATCCTGCTTGCAATGATT
GGTGCACCATTCTTCTTATTCTTACTTCAAAGAGGGAGGGTTGCTTCATGA

Protein sequence : 
MTTVKAHDPRRKRRRITFIVVIILLILAFFYGLTTGSVKITYSDAWQTLTGGGSDLANQLIWNLRLPRLLIAFLVGAALA
IAGCLLQGVMRNPLADPGVIGVSAGGGFVAILMTLAFPALASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAI
NAFIGAMTSGVMVLYSNRVQSVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRSSNVLLLGDDAAKLLGFSVERHR
FFIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLIIGNDYKYLLPLSALGGALLVGFADTAARSWFGSIELPVGILLAMI
GAPFFLFLLQRGRVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 1e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M642_10340 YP_008272878.1 iron ABC transporter permease BAC0163 Protein 8e-26 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M642_10340 YP_008272878.1 iron ABC transporter permease VFG1043 Protein 7e-26 43