Gene Information

Name : M642_10335 (M642_10335)
Accession : YP_008272877.1
Strain : Listeria monocytogenes C1-387
Genome accession: NC_021823
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1989542 - 1990333 bp
Length : 792 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAACCTGCATTAGAACTAAAAAATGTTTCTTTCTCACGTAAAAGAGATTTCGAAATGAAAAATGTGAGCGCGAGCAT
TCCAGAAGGGAAAATCACTACGCTTATCGGTCCAAACGGCTCGGGAAAATCGACTATGCTGCGTTTGATGATGCGCCTTT
TGACGCCGGATAGCGGGGAGATTTTCTTAAATGATAAAAACATTACTGAAATCCCATCTAAAGATTTAGCGAAAAAAATG
ACGATGCTATCACAAGCTCCAGAAGGTTTGGTAGATGTGATGGTGCATGATTTAGTGGCGTATGGCCGTTTGCCGCACCG
AAGCTGGCTCTCCACTTTGCAAGAAGAGGATGAGGCGGTCATTCACTGGGCTATTAAAGTATGCAATTTAGAAGAATTGG
CTTATCGCCCACTGCATTCGTTATCAGGCGGGGAACGACAACGCGCTTGGCTCGCCATGGCTCTTGCACAAAAAACACCT
ATTTTATTACTAGATGAGCCCACGACTTATTTAGATATTGCGCATCAACTGGAGCTTTTAGATTTACTCGTGCATTTAAA
TAAAGAATATAATTTAACCATCGTGCTCGTTTTACATGATTTAAATCAGGCAGCAATATACAGTGACCATGTTTTTGTAT
GCGAAAATGGACAATTAGTCAAAGACGGCTCGCCTAGAGAAGTTTTCACGACAGAGCTTCTTCGCGATGTTTTTCATATT
ACGGCGGATATTACCGAAAAAGACGGAAAGCAGCATATTCATCCACTTGCTTCGACTCGTTTTGAATATTAA

Protein sequence : 
MKPALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEIFLNDKNITEIPSKDLAKKM
TMLSQAPEGLVDVMVHDLVAYGRLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTP
ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQLVKDGSPREVFTTELLRDVFHI
TADITEKDGKQHIHPLASTRFEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-40 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-44 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-44 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-44 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-44 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-39 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-39 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-38 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M642_10335 YP_008272877.1 iron ABC transporter ATP-binding protein BAC0164 Protein 3e-40 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M642_10335 YP_008272877.1 iron ABC transporter ATP-binding protein VFG1042 Protein 2e-40 49
M642_10335 YP_008272877.1 iron ABC transporter ATP-binding protein VFG0925 Protein 6e-35 43