Gene Information

Name : M642_07330 (M642_07330)
Accession : YP_008272301.1
Strain : Listeria monocytogenes C1-387
Genome accession: NC_021823
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1420001 - 1420933 bp
Length : 933 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAAAAATAATAGTTGTATCCCTTTTCGCATTAGTAGTTGTGCTTGCGGGGTGTTCCAGTCAAAATAGCGATTCGAA
AAAAACAGACGGCAAATTAAATGTGGTAGCAACCTATTCGATATTAGCAGATATTGTAAAAAATGTAGGCGGGAACAAAA
TTGAACTTCATAGTATTGTACCTGTTGGCGTGGATCCGCATGAATATGATCCCTTACCAGCCAACATTCAAAGTGCTGCG
GATGCTGATTTAATTTTTTACAATGGATTGAATTTAGAAACAGGGAACGGTTGGTTTGATCGTATGTTAGAAACGGCGGA
TAAATCAAGAGAAGACAAGGATCAAGTGGTGGAGTTAAGTAAAGGTGTAAAACCCAAATACTTAACGGAAAAAGGCAAGA
CATCTGAAACAGATCCACATGCATGGCTTGATCTTCATAACGGAATTATCTATACCGAAAATGTGCGTGATGCACTTGTA
AAAGCGGATCCAGACAATGCGGATTTTTATAAAGAGAATGCGAAAAAATATATCGACAAATTAGCTACTCTGGATAAAGA
AGCAAAACAAAAATTTGCAGATTTGCCAGAAAATCAAAAAACATTAGTAACTAGCGAAGGTGCCTTTAAATATTTTGCAG
CTCGCTACGGATTAAAAGCAGCATATATTTGGGAGATAAATACAGAAAGCCAAGGTACTCCAGACCAAATGAAACAAATT
GTCGGTATCGTGGAAAAAGAAAAAGTGCCTAATCTATTTGTCGAAACAAGCGTAGATCCACGTAGTATGGAAAGTGTATC
TAAAGAAACAGGAGTACCAATTTTCGCGAAAATCTTCACGGACTCCACTGCAAAAAAAGGCGAAGTGGGCGACACGTATT
TAGAAATGATGCGGTACAATTTAGATAAAATCCATGATGGTTTAGCCAAATAA

Protein sequence :
MKKIIVVSLFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILADIVKNVGGNKIELHSIVPVGVDPHEYDPLPANIQSAA
DADLIFYNGLNLETGNGWFDRMLETADKSREDKDQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV
KADPDNADFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQI
VGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEMMRYNLDKIHDGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 3e-78 55
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 2e-78 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M642_07330 YP_008272301.1 manganese ABC transporter substrate-binding protein VFG2157 Protein 5e-135 99
M642_07330 YP_008272301.1 manganese ABC transporter substrate-binding protein VFG2165 Protein 5e-83 61
M642_07330 YP_008272301.1 manganese ABC transporter substrate-binding protein VFG1359 Protein 1e-78 54