|
Name : sgaE (M636_07175) Accession : YP_008270673.1 Strain : Genome accession: NC_021822 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.4 Position : 1603293 - 1604033 bp Length : 741 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTCTGAACAAACCGTCTGGAATGATGCGAACTCATTAGTCGAACGAATCAAAACGCTGCGTCACCAAGTCTGGCAAGC CAATATGGATTTACAACGTCATAACCTTGTGACGTTCACGTGGGGCAATGTGTCAGGCATCGATAGAGAATCTGGATTGG TTGTTATCAAACCCAGCGGTGTTGAGTACTACGAACTGAATGCTGAAAACATGGTGGTGGTCGATCTGCACGGCCAAGTG GTTGAAGGGAAACTCAACCCATCTTCCGACACGGCCACGCATCTAGAGCTTTATCGCCATTTCCCGGAGATTGGCGGCAT CGTTCACACCCACTCTCCTCAGGCAACGGCATGGGCACAAGCAGGCAGAGCAATTCCCGCGTTGGGCACAACTCATGCGG ATTATTTCTACGGACAAATTGCGTGCACTCGCGCCTTGAGCGACGAAGAGATCGCGCACAACTACGAGCTCAACACTGGC AAAGTCATCGTCGAAACCATCGGTTATTCAAACGTTATGGCGTCACCCGGAATTTTGGTCAAAGAACACGCACCTTTTAC TTGGGGTAAAAGCCCTGCTCAAGCGGTTCACAACGCCGTAGTGGTTGAAGTTGTCGCTGGCATGGCCTTGCAAACACTGC AAATCAATGCCGAGGTAGACACTCTTAACCCTTCGCTTCTCGACAAACATTATTTACGTAAGCACGGCGCGAACGCCTAC TACGGTCAAAGCAAAAAATAA Protein sequence : MSEQTVWNDANSLVERIKTLRHQVWQANMDLQRHNLVTFTWGNVSGIDRESGLVVIKPSGVEYYELNAENMVVVDLHGQV VEGKLNPSSDTATHLELYRHFPEIGGIVHTHSPQATAWAQAGRAIPALGTTHADYFYGQIACTRALSDEEIAHNYELNTG KVIVETIGYSNVMASPGILVKEHAPFTWGKSPAQAVHNAVVVEVVAGMALQTLQINAEVDTLNPSLLDKHYLRKHGANAY YGQSKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 3e-55 | 57 |
