Gene Information

Name : ompR (M636_06415)
Accession : YP_008270521.1
Strain :
Genome accession: NC_021822
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1430968 - 1431699 bp
Length : 732 bp
Strand : -
Note : part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of o

DNA sequence : 
ATGGAACGGCATACAACCAACGTGGTGGCGAACATATTGTTGATTGAAGACGATGATGACTTGGCCGAACTGGTTCAAAT
GCATCTCAAGTTTCAGGGGCATCAAGTCAGTCGAGAATCCAGCGTTGCAGCGGGTAGAAATACTTATCAGCAGCAGTCGT
TTGATTTGGTGATCCTCGACAGAGGTTTACCCGATGGTGATGGTTTAGATATCTGCCATCACTTGCGCCAGCAGCAAGAT
TGGACGCCGGTTTTGGTGTTGACTGCAAGAGACGGTGAGATGGATAAAGTGGATGGATTGGAAGCTGATGTCGACGATTA
CATCACAAAGCCGTTTAGTGTTTTAGAGTTTCAAGCTCGGGTGAGAAATGTACTTCGGCGCGTTAATCAAGTTGCTGAAA
AGCCGACTCCAGAGAGAGCAGAAGATGGGGCGCTTAACTTTGGTGACCTTAAGATCATTCCCCAACTACATCAGGTTTCG
CTCAATGATATAGACGTCGCTCTGACGGCAACCGAATTTACCTTGCTGCAGTTTCTCGCCACTCGTCCCGGTCGAGTTTA
CAGTAAGGATGAGCTGTTGGATCATGTCTGGAACACCAATCATACTGGGTACCATCACACGGTTTGTAGCACCATTAATC
GCTTGCGCAGCAAGCTGTCGTTGTCGGACTCAGAGCATCATTTTATTCAAACGGTTTGGGGTGTTGGGTACAAATTTCAG
CCGCGCCCATAA

Protein sequence : 
MERHTTNVVANILLIEDDDDLAELVQMHLKFQGHQVSRESSVAAGRNTYQQQSFDLVILDRGLPDGDGLDICHHLRQQQD
WTPVLVLTARDGEMDKVDGLEADVDDYITKPFSVLEFQARVRNVLRRVNQVAEKPTPERAEDGALNFGDLKIIPQLHQVS
LNDIDVALTATEFTLLQFLATRPGRVYSKDELLDHVWNTNHTGYHHTVCSTINRLRSKLSLSDSEHHFIQTVWGVGYKFQ
PRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ompR YP_008270521.1 transcriptional regulator HE999704.1.gene2815. Protein 4e-26 41
ompR YP_008270521.1 transcriptional regulator NC_002952.2859905.p0 Protein 2e-20 41
ompR YP_008270521.1 transcriptional regulator NC_007622.3794472.p0 Protein 2e-20 41
ompR YP_008270521.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-20 41
ompR YP_008270521.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-20 41
ompR YP_008270521.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-20 41
ompR YP_008270521.1 transcriptional regulator NC_003923.1003749.p0 Protein 1e-20 41
ompR YP_008270521.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-20 41
ompR YP_008270521.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-20 41
ompR YP_008270521.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-20 41
ompR YP_008270521.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ompR YP_008270521.1 transcriptional regulator VFG1702 Protein 2e-26 41