Name : ureC (M634_24560) Accession : YP_008269224.1 Strain : Genome accession: NC_021821 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : - COG ID : - EC number : 3.5.1.5 Position : 1820225 - 1821928 bp Length : 1704 bp Strand : - Note : ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alp DNA sequence : ATGAGTAAAATTTCGCGTCAGGCCTATGCCGATATGTTTGGGCCTACTACTGGCGATTGCGTGCGTTTAGCTGACACGGA GCTGTTTTTGCAAGTCGAACAGGATTTCACGATCTACGGCGAAGAGGTCAAGTTTGGCGGCGGTAAAGTCATTCGTGATG GTATGGGACAAAGCCAAGTGACGAATGATGGCTGTGTCGATGTTCTGATCACTAATGCGTTGATACTCGATCATTGGGGG ATCGTGAAAGCTGACATTGGCATCAAAAACGGCAGAATAGCGGGCATTGGTAAAGCAGGAAATCCGGATATTCAGCCAAA AGTAGATATTGTCATTGGCCCAGCAACAGAGGTCATTGCTGGTGAAGGTAAAATTATCACCGCTGGTGGTATTGATACGC ACATTCACTTTATCTGCCCACAACAAGCAGAAGAAGGCTTGTCATCGGGTGTCACTACTTTTATCGGTGGTGGCACTGGC CCTGTAGCTGGTACTAATGCTACAACAGTCACCCCTGGCATCTGGAATATGCACAGAATGTTGGAAGCAGTCGATGAGCT TCCTATCAACGTCGGGCTATTCGGAAAAGGTTGTGTGAGTCAACCAGAAGCGATCCGTGAGCAGATTGAAGCGGGCGCGA TGGGCTTAAAAATCCATGAAGACTGGGGGGCAACCCCTGCAGCGATTAACAACTGTTTGAACGTTGCGGATGAGATGGAT GTTCAAGTGGCCATTCACTCCGATACCCTTAATGAAGGTGGTTTCTATGAAGAAACTGTTCGTGCTATTGGTGATCGAGT CATTCACGTCTTTCACACTGAAGGGGCTGGTGGCGGTCATGCGCCTGATGTGATCAAGTCAGTAGGTGAACCTAACATCA TTCCAGCATCAACAAACCCAACTATGCCTTACACCATAAATACAGTGGATGAGCACTTGGATATGTTGATGGTCTGCCAT CACTTAGATCCTTCCATTCCTGAGGATGTGGCATTTGCTGAATCACGAATTCGTCGAGAAACTATTGCTGCCGAAGATAT TCTTCATGATTTGGGGGCTATCTCTGTTATGTCATCGGACTCGCAAGCAATGGGACGAGTTGGAGAGGTAATTACTCGAA CATGGCAATGTGCAAACAAAATGAAGTTGCAGCGCGGTTCTTTAGAAGGGGATAGCGCATTCAACGACAACCAACGTCTC AAACGTTATGTCGCGAAGTACACTATTAATCCAGCTATAGCACATGGCATCTCGCATGAAGTTGGTTCTATCGAGGTTGG CAAACTGGCAGATATCGTTATCTGGGACCCTGCCTTTTTCGGTATTAAACCTGCGCTTGTTGTTAAAGGTGGATTGGTAG CTTATGCCCCGATGGGAGACGTGAACGCAGCGATCCCAACGCCACAGCCTGTACATTATCGCCCAATGTATGCAAGCTAT GGAAAGGCGATGTACAGCACATCAATGATTTTTATGTCGCAAGCGAGTATCGAAGCAGGGGTGCCTGAAAAACTGAAGCT ACAAAGTATGATTGGTCAGGTAAAAGGTTGTCGAAACCTTTCTAAGCAAGACATGGTACACAACAGTTACACCCCGACGA TTGAGCTAGACTCGCAGACCTATCTAGTTAAAGCTGATGGTATTCCTCTTGTTTGCGAGCCTGCAACAGAGCTACCAATG ACGCAGCGCTATTTTTTATTCTAG Protein sequence : MSKISRQAYADMFGPTTGDCVRLADTELFLQVEQDFTIYGEEVKFGGGKVIRDGMGQSQVTNDGCVDVLITNALILDHWG IVKADIGIKNGRIAGIGKAGNPDIQPKVDIVIGPATEVIAGEGKIITAGGIDTHIHFICPQQAEEGLSSGVTTFIGGGTG PVAGTNATTVTPGIWNMHRMLEAVDELPINVGLFGKGCVSQPEAIREQIEAGAMGLKIHEDWGATPAAINNCLNVADEMD VQVAIHSDTLNEGGFYEETVRAIGDRVIHVFHTEGAGGGHAPDVIKSVGEPNIIPASTNPTMPYTINTVDEHLDMLMVCH HLDPSIPEDVAFAESRIRRETIAAEDILHDLGAISVMSSDSQAMGRVGEVITRTWQCANKMKLQRGSLEGDSAFNDNQRL KRYVAKYTINPAIAHGISHEVGSIEVGKLADIVIWDPAFFGIKPALVVKGGLVAYAPMGDVNAAIPTPQPVHYRPMYASY GKAMYSTSMIFMSQASIEAGVPEKLKLQSMIGQVKGCRNLSKQDMVHNSYTPTIELDSQTYLVKADGIPLVCEPATELPM TQRYFLF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 71 |
ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 71 |
ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-168 | 63 |
ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-168 | 63 |
ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-168 | 63 |
ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-168 | 63 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ureC | YP_008269224.1 | urease subunit alpha | VFG0270 | Protein | 4e-161 | 61 |