Gene Information

Name : M634_24470 (M634_24470)
Accession : YP_008269206.1
Strain :
Genome accession: NC_021821
Putative virulence/resistance : Virulence
Product : hemolysin D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1799025 - 1800461 bp
Length : 1437 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAAACATGGTTTATGGGATTATATGCGTTTTTATTGCGTTATAAAATCGTTTGGAGTGAAACGTGGAAAATTAGGCA
TCAATTAGATGCTCCTGTTCGAGAAAAGGATGAAAACGAATTTTTGCCTGCCCATCTAGAGTTAATTGAAACACCAGTGT
CTAAGAAGCCACGTTTAATTGCATATTTTATTATGGCTTTTTTACTTATTGCTATTGTTTTATCTATTGTAGGCAAGGTT
GAAATTGTTGCCACTGCAAATGGAAAGCTAACATCAAGTGGGCGCAGTAAAGAAATTAAACCTATTGAAAACTCGATAGT
TAAAGAAATTCTGGTAAAAGAGGGAGAATATGTTAAAAAAGGGCAAATATTATTGCAACTTACAGCATTAGGCGCAGAAT
CTGATACTTTAAAGTCACAATCATCACTGTTACAGTCAAAGTTGGAACAGGTGCGTTATCAGACGCTGAAAGAATCCATT
GAATTAAATAGAATTTCTGATTTAATCTTACCAGATGACTTTTATTTTAATGACATTTCTGAAGACGAAAAGCTTCGTTT
GATATCTTTGATTAGTGAACAGTTTTCTACTTGGCAAAATCAAAAATATCAAAAAAAATTAAGCTTAGATAAGAAAAAGT
CAGAGAGATTAACAATACTTGCACGTATAAATCGTTATGAGCATTTATCACGTGTTGAAAAAAGTCGTTTAGATGACTTT
AAAAATTTATTGCGAAAGCAAGCAATTGCAAAACATGTAGTCATTGAGCAAGAGAATAAATATCTCGAAGCGGAAAACGA
ACTGCATGTTTATAAATCACAGTTAGAGCAAATTGAAAGTGAAATATTATCAGCTAAAGAGGAGTATCATCTTGTTACCA
AATTGTTTAAAAATGAAATTTTAGATAAAATACGACAAACAACAGATAGCATTAAGTTATTAACACTGGAAGTGGAAAAA
AATAAAGAGCGCCAACAGGCTTCGATAATCAGGGCTCCTGTGTCAGGAAAAGTTCAGCAAATAAAAGTTCATACTGAAGG
CGGTGTTGTTACAACAGCCGAAACATTAATGGTAGTAGTACCAAATAATGATTTACTAGAAGTTACCGCATCAGTACAAA
ATAAAGATATTGGGTTTATTCAAATTGGACAGAGCGTCATTATTAAAGTAGAGTCATTTCCTTATACGCGATACGGTTAC
TTGACTGGAAAGGTGAAAAATATAAACTTGGATGCTATAGAAGACCCCAAATTTGGACTTGTTTTTAATGTCATTGTTTC
TCTTGAAGATAATTATTTATCAACTAAACATAACAAACTTCCATTAAGCTCTGGTATGTCTGTAACCGCTGAGATAAATA
CAGGAATGCGAAGCATAATAAGTTATCTTCTTAGTCCTTTGGAAGAGTCAGTAACCGAAAGTTTACATGAGCGTTAG

Protein sequence :
MKTWFMGLYAFLLRYKIVWSETWKIRHQLDAPVREKDENEFLPAHLELIETPVSKKPRLIAYFIMAFLLIAIVLSIVGKV
EIVATANGKLTSSGRSKEIKPIENSIVKEILVKEGEYVKKGQILLQLTALGAESDTLKSQSSLLQSKLEQVRYQTLKESI
ELNRISDLILPDDFYFNDISEDEKLRLISLISEQFSTWQNQKYQKKLSLDKKKSERLTILARINRYEHLSRVEKSRLDDF
KNLLRKQAIAKHVVIEQENKYLEAENELHVYKSQLEQIESEILSAKEEYHLVTKLFKNEILDKIRQTTDSIKLLTLEVEK
NKERQQASIIRAPVSGKVQQIKVHTEGGVVTTAETLMVVVPNNDLLEVTASVQNKDIGFIQIGQSVIIKVESFPYTRYGY
LTGKVKNINLDAIEDPKFGLVFNVIVSLEDNYLSTKHNKLPLSSGMSVTAEINTGMRSIISYLLSPLEESVTESLHER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyD NP_755449.1 hemolysin D Virulence PAI I CFT073 Protein 1e-174 81
hlyD AAC61717.1 chromosomal hemolysin D Virulence PAI I CFT073 Protein 2e-157 81
hlyD CAD33761.1 Hemolysin D Virulence PAI I 536 Protein 1e-174 81
hlyD CAD42037.1 HlyD protein Virulence PAI II 536 Protein 9e-175 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M634_24470 YP_008269206.1 hemolysin D VFG1502 Protein 8e-175 81
M634_24470 YP_008269206.1 hemolysin D VFG1556 Protein 5e-175 81
M634_24470 YP_008269206.1 hemolysin D VFG0908 Protein 6e-175 81
M634_24470 YP_008269206.1 hemolysin D VFG0843 Protein 4e-113 56