Gene Information

Name : M634_24295 (M634_24295)
Accession : YP_008269171.1
Strain :
Genome accession: NC_021821
Putative virulence/resistance : Virulence
Product : DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1766014 - 1769532 bp
Length : 3519 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAATAATCAGGGCTGGATTCACTATTGGCGTAATTCTCTTGCCGATGCCGATAGCGCGAAAGGTGCATTAAAAAAGCA
ATACCTGAAAAATTATGTGCGAACGACAACCGACGAGTTCAAAGAAGGTAAGCTTAAACCTGATTCTACATTGCTAGAAG
ATCTGTTTCGCAATGAACCAGATACCCTAACCGCTGTACAAATTCATCATCGACCGGTCACCTACTATCTTCGGAAAGTT
CATGGCAAAGATTACAGCGGTAATATGCCTAGTGTACTGACACCAATTGTCTGCACTTTATGGGTTAATCGTGAAGGGCT
ACTATTTCCTCATACCACGCCATTCATACCTCGTGATTTGCTTGCCCCTCAAGGAAATGACACGTTTACTATCGCTGACG
TCGAGAAGCTCGATGAATTCCTGACAAAAAATGAAATTCCAGCGCAGTCTACTGAAAACATTCCAGCCAAATTCGAACAA
GAAGAACAGTATCAGAACCATCAAAAAGATTGGCACAACTACTACGGACTCACCCAAAAACTATTTGCCGATTACTGCGA
TAGAAACCGAATCAAGCAGTTCTACGAACACATTGAAAGTCGTGGCTTAGTCAACAAAATCAGCGAGTGCTTGGGAGCTT
CAAGGCATATTTTAAAACTGTACGATAACCTGAGCACTTCAAGCACAACCTTGCCTCTGCTTGATAGTTACGCGGCAAAA
ACAGTAACCAACCATGATGAATGTATTGATGTATCTCAGACAGTGAATTCGCGTTTGGGCCACTCAAATAGTCAATTCCC
GCTAGCTAAAGCGCAATGCGATGCCTTGGCCCATACCTTAGCCATGCAAGAAGGTGATATTCTTGCGGTAAATGGTCCTC
CTGGCACAGGTAAAACAACGTTTGTTCTATCTGTAGTCGCATCACTGTGGATTGAATCTGCGCTAAAAGAGAGTCAGCCG
CCGCTAATCATTGCGGCATCGACTAATAATCAAGCAGTAACCAACATCATTGATGCCTTTAGTAAAGACTTCGATGAAGG
CGACGACGAACTATCAGGCCGATGGTTGCCCGATATTTTTAGCTATGGTGGCTACCTGCCATCGGCGTATGGAGAATTGG
AAGCAGCCAAAAGTTACCAAACTAAGCATTTCTATGAAAAAGTCGAGCAGTTGGATTTTCTCGATCAAGCCCAAGCGCAT
TATTTGGATAGAGCAAAACAGGCGTTTCCACAACAGAATTTTGCTGATGTAACGCAAGTTAAAGCGTATCTCCTTGCCGA
ATTGCGCCAACATCAAAACCAGTTAGATCACATCCAAAACAATTGGCATCACTACAACCGCCAACTAAATGACATCCATT
CTCGGCTGGGGAACAATCCCCAACAAACATTGGCAGATCAACAACAAGCCGTTTCTAATGCGCAAGCATTGAAAGATAAC
GCCAAAGAACAGTTAACTGCGTGGCGAAGCTACCTCGGCAATGAATCTACATGGTTAACTCTGTTTAAGTGGTTACCGCC
AATTAAGAATAAACTTGAACTCCAGCGCAGGAGTTTCATGTATAACCTTATTGAGCACGATGAAGAGCAAATTGAAAATC
TGTCATCAGACCGATTTGAGAGCCTACTCAAGCAAGTATTTTCTAGTAAAAAAGACGATTTTGATGATCAAAAAAATCGG
TATCAATCTTGGCTAGAGCAGTATCAAGAGTTTGAGCAATCACAACTGAATTGGCTTAATTCTATCAATAACTTTACTGA
AGACTCTCCAGAGCAAACTATTCCACAACTGACTGACATCGATTCGGTTTTAGATATCACGACCCGTTTTCGAATGTTCC
GCTTAGCGGTCCATTACTGGGAAGCATGCTGGCTGCTCAGTTGCCGAGATTTGGGTCAAGAGTTGAACAAGCAGGCCCGG
AAAACAGGTTTGAAAACAGTTCGTCCTCGCTGGCAACGCCGAATGATGCTTACTCCTTGCATTGTATCAACGTTCCATTC
TCTGCCTTCTCATATGACTTACCAGTCTCACGTTGGAAATAATGAATTTGAAACTGACTATCTGCTTAATGAAATCGACC
TTTTGATCGTTGATGAAGCAGGCCAAGTAGCTCCAGAAGTTGCCGCAGCCTCGTTCTCACTAGCCAAAAAAGCGTTGGTG
ATTGGTGATATTTACCAAATCCCGCCGATTAGAAATGTGTGCTCATCAATTGACCGGGGTAATTTAAAGCAGCATAAAGT
TATCAGCTCTGATGATGAATACACAGTCATTCAAGAGGAAGGCCGAAGTGTAGTGACTGGCAGTGTGATGCATGTAGCGC
AACAAGCAAGCCGCTTTCATTATATGCCGGAAGCTGAGCCTGGAATGTTTTTGCAAGAACATAGACGCTGCTACGATGAA
TTAATCTCATACTGCAATGACCTTTGCTATCAAGGTATCCTGATCCCCAAGCGAGGACAAGCGACCGAAGATAGCCTCTA
CTCTCCTTTCAGTCATTTGCACGTCGACGGTATCGCGGAATCATTTAGCGGCAGCCGACGCAATAAGTTAGAAGCAGAAA
CTATCGCTGCATGGCTACATGCCAATAAGGTTGAAATAGAGAATTACTACGGCGAGCCACTGGCCAAGTGTGTGGGTATC
ATTACTCCATTTTCAGCTCAAGTGAACCAGATCAAGACCGCGTGTGGTGAGTTCGATATCAAAGCAGGCAAGGGGGATGA
CCAACTAACCGTTGGCACCGTTCACTCTCTTCAAGGTGCTGAACGCAAAATCATTATTTTTTCCCAGGTGTACACCAGAC
ACAACGATGGCGGGTTTATCGATATGGATCCGTCAATGCTCAACGTCGCTGTCTCTCGAGCCAAAGATGCATTCTTGGTG
TTTGGTGATTTGGATATCATTGAAGCTGCGCCATCATCTTCTCCACGAGGATTACTCGCCAAGTATCTCTTCACTGACGA
GCGAAATGAGCTTGAGTTTAGTGTTGGTCAACGCCCCGATTTATTACAAATATGCGGCCATCCGAAACTGCTAACCAATG
CCGAAGAGCACGATGCGTTCTTATCAAAACTGCTGAGGGAAGTACAACGAAAAATAGATATCGTCTCGCCTTGGTTACTG
CTAGACAAACTGCAATCAACTGGTCAGTTAGAACTACTAAAAACAGCACTGCACAAAGGTGTCCAGATAACCATACACAC
CGACAGACATTTCAATACCACGGTCGCAAACCACCCGGATACTAATAAAGTAAAAGCGTTTCAACATTGCTGCGCGACCT
TGGAACAGCTTGGTATCGTTATCAATGTGATAAATGGTGTCCATAGTAAAAGCGTTTTTGCTGATGATCGGTATATGGCG
GTGGGGTCATTCAATTGGTTTAGTGCAAGCAGAAGCGGAAAATACGCTAATATCGAGACATCATTAATCTATGTCGGTGA
GTTAGAGAAGGAGATCAAAACTCAACTCAACTTCTTAAATAGCCGAAGCTGCAACACAAACAAGCAGCCCGTGACGTAG

Protein sequence :
MNNQGWIHYWRNSLADADSAKGALKKQYLKNYVRTTTDEFKEGKLKPDSTLLEDLFRNEPDTLTAVQIHHRPVTYYLRKV
HGKDYSGNMPSVLTPIVCTLWVNREGLLFPHTTPFIPRDLLAPQGNDTFTIADVEKLDEFLTKNEIPAQSTENIPAKFEQ
EEQYQNHQKDWHNYYGLTQKLFADYCDRNRIKQFYEHIESRGLVNKISECLGASRHILKLYDNLSTSSTTLPLLDSYAAK
TVTNHDECIDVSQTVNSRLGHSNSQFPLAKAQCDALAHTLAMQEGDILAVNGPPGTGKTTFVLSVVASLWIESALKESQP
PLIIAASTNNQAVTNIIDAFSKDFDEGDDELSGRWLPDIFSYGGYLPSAYGELEAAKSYQTKHFYEKVEQLDFLDQAQAH
YLDRAKQAFPQQNFADVTQVKAYLLAELRQHQNQLDHIQNNWHHYNRQLNDIHSRLGNNPQQTLADQQQAVSNAQALKDN
AKEQLTAWRSYLGNESTWLTLFKWLPPIKNKLELQRRSFMYNLIEHDEEQIENLSSDRFESLLKQVFSSKKDDFDDQKNR
YQSWLEQYQEFEQSQLNWLNSINNFTEDSPEQTIPQLTDIDSVLDITTRFRMFRLAVHYWEACWLLSCRDLGQELNKQAR
KTGLKTVRPRWQRRMMLTPCIVSTFHSLPSHMTYQSHVGNNEFETDYLLNEIDLLIVDEAGQVAPEVAAASFSLAKKALV
IGDIYQIPPIRNVCSSIDRGNLKQHKVISSDDEYTVIQEEGRSVVTGSVMHVAQQASRFHYMPEAEPGMFLQEHRRCYDE
LISYCNDLCYQGILIPKRGQATEDSLYSPFSHLHVDGIAESFSGSRRNKLEAETIAAWLHANKVEIENYYGEPLAKCVGI
ITPFSAQVNQIKTACGEFDIKAGKGDDQLTVGTVHSLQGAERKIIIFSQVYTRHNDGGFIDMDPSMLNVAVSRAKDAFLV
FGDLDIIEAAPSSSPRGLLAKYLFTDERNELEFSVGQRPDLLQICGHPKLLTNAEEHDAFLSKLLREVQRKIDIVSPWLL
LDKLQSTGQLELLKTALHKGVQITIHTDRHFNTTVANHPDTNKVKAFQHCCATLEQLGIVINVINGVHSKSVFADDRYMA
VGSFNWFSASRSGKYANIETSLIYVGELEKEIKTQLNFLNSRSCNTNKQPVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3169 NP_838460.1 superfamily I DNA helicase Not tested SHI-1 Protein 0.0 42
SF2965 NP_708739.1 superfamily I DNA helicase Not tested SHI-1 Protein 0.0 42
unnamed CAD42018.1 hypothetical protein Not tested PAI II 536 Protein 0.0 42
ORF_2 AAZ04413.1 superfamily I DNA helicase Not tested PAI I APEC-O1 Protein 0.0 42
APECO1_3532 YP_854230.1 superfamily I DNA helicase Not tested PAI I APEC-O1 Protein 0.0 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M634_24295 YP_008269171.1 DNA helicase VFG0627 Protein 0.0 42
M634_24295 YP_008269171.1 DNA helicase VFG1537 Protein 0.0 42