Gene Information

Name : SE451236_20465 (SE451236_20465)
Accession : YP_008267080.1
Strain : Salmonella enterica 08-1736
Genome accession: NC_021820
Putative virulence/resistance : Virulence
Product : type III secretion system needle complex protein PrgH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4272132 - 4273310 bp
Length : 1179 bp
Strand : -
Note : with InvG, PrgI, and Prg K makes up the membrane spanning needle complex; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGAAACATCAAAAGAGAAGACGATAACAAGCCCAGGGCCATACATAGTTCGATTACTTAACAGCTCACTGAACGGCTG
TGAGTTTCCATTGCTGACAGGCCGAACACTCTTTGTGGTAGGTCAGAGTGATGCGCTCACTGCTTCAGGTCAACTCCCTG
ATATACCTGCCGATAGCTTTTTTATCCCGCTGGACCATGGCGGAGTAAATTTTGAAATCCAGGTGGATACGGATGCGACC
GAAATTATACTCCATGAGCTGAAAGAAGGAAATTCTGAATCTCGTTCGGTGCAATTAAATACGCCAATACAGGTCGGTGA
ATTGCTTATCCTGATTCGCCCGGAAAGCGAGCCGTGGGTGCCCGAGCAGCCTGAGAAGTTAGAAACGTCTGCAAAAAAGA
ACGAGCCGCGTTTTAAAAACGGAATTGTAGCAGCACTGGCCGGGTTTTTTATATTGGGAATTGGGACTGTGGGGACGTTA
TGGATACTTAACTCGCCGCAGCGGCAGGCCGCAGAGCTCGATTCGTTATTGGGGCAGGAGAAGGAGCGTTTTCAGGTGTT
GCCAGGCCGGGACAAAATGCTCTATGTCGCTGCGCAAAATGAAAGAGATACGTTGTGGGCTCGTCAGGTTTTAGCGAGGG
GCGATTATGATAAAAATGCGCGAGTGATTAACGAAAACGAAGAAAATAAGCGTATCTCTATCTGGCTGGATACCTATTAT
CCGCAGCTGGCTTATTATCGGATTCATTTCGATGAGCCGCGTAAACCCGTTTTCTGGCTAAGCCGCCAGCGAAACACGAT
GAGCAAGAAAGAGCTCGAGGTGTTAAGTCAAAAGCTGAGAGCGCTAATGCCTTACGCGGATTCGGTTAACATCACGTTGA
TGGACGATGTTACCGCAGCAGGCCAGGCGGAAGCGGGGCTAAAACAGCAGGCGTTACCTTATTCCCGCAGGAATCATAAG
GGGGGCGTAACGTTTGTTATTCAGGGGGCGCTCGATGATGTAGAAATACTCAGAGCCCGTCAATTTGTCGATAGCTATTA
CCGCACATGGGGAGGACGCTATGTGCAGTTTGCGATCGAATTAAAAGATGACTGGCTCAAGGGGCGCTCATTTCAGTACG
GGGCGGAAGGTTATATCAAAATGAGCCCAGGCCATTGGTATTTCCCAAGCCCACTTTAA

Protein sequence :
METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDAT
EIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPWVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTL
WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISIWLDTYY
PQLAYYRIHFDEPRKPVFWLSRQRNTMSKKELEVLSQKLRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHK
GGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgH NP_461795.1 needle complex inner membrane protein Virulence SPI-1 Protein 0.0 100
prgH NP_457268.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 0.0 99
prgH NP_806477.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 0.0 99
prgH YP_217793.1 cell invasion protein Virulence SPI-1 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SE451236_20465 YP_008267080.1 type III secretion system needle complex protein PrgH VFG0536 Protein 0.0 100