Gene Information

Name : SE451236_19690 (SE451236_19690)
Accession : YP_008266930.1
Strain : Salmonella enterica 08-1736
Genome accession: NC_021820
Putative virulence/resistance : Unknown
Product : Presumed portal vertex protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4114231 - 4115253 bp
Length : 1023 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGCAAGCGCAAGCCACGCAAAGCAGTCGCCATGACCGCCAGTGCACCGCAAAAAATGGAGGCGTTCACCTTCGGTGA
GCCGGTGCCGGTACTCGATAAGCGCGACATTCTGGATTACCTCGAGTGCACCAGTAACGGCAAATGGTACGAGCCGCCGG
TCAGCTTCTCCGGGCTGGCAAAAAGCCTGCGCTCTGCAGTGCATCACAGCTCACCGATTTACGTTAAACGCAACGTACTC
GCGAGCACCTACATTCCGCACCCGCTGTTATCCCGTCAGGATTTCAGCCGTTTTGCGCTCGACTATCTGGTATTCGGTAA
CGCCTTTCTTGAGCAGCGCCACAGCGTCACCGGCCAGTTAATCAAACTGCTGACTTCACCGGCAAAATATACCCGGCGCG
GGGTCGATGACTCGGTTTTCTGGTTTGTGGAAAACTTCACTCAACCGCATGAGTTCGCACCCGATACCGTGTTCCACCTG
CTGGAGCCTGATATTAATCAGGAGATTTACGGCCTGCCTGAATATCTCAGCGCGCTTAATTCCGCATGGCTGAATGAATC
CGCGACGCTGTTCCGCCGCAAGTATTACCAGAACGGCGCGCACGCAGGTTACATCATGTATGTGACTGACCCTGCGCAAA
GCGCGACTGACGTCGAATCGCTGCGCGATGCAATGCGTAACTCTAAAGGGCTCGGCAACTTTAAGAACCTGTTTTTCTAC
TCACCGAACGGGAAACCGGACGGCATAAAAATCGTGCCACTGAGCGAGGTCGCCACAAAGGATGACTTTTTTAACATCAA
AAAAGCCAGCGCTGCCGACCTGATGGATGCGCACCGCGTACCGTTCCAGCTCATGGGCGGCAAGCCTGAGAATATTGGCT
CAATGGGTGACGTTGAGAAGGTGGCAAAGGTCTTTGTGCGTAACGAGTTATCGCCGCTACAGGACAGGTTCAGGGAGGTA
AACGACTGGCTCGGCATGGAGGTCATCAGGTTCAAAGAGTACACCCTCGACAACCCGGAATAA

Protein sequence :
MSKRKPRKAVAMTASAPQKMEAFTFGEPVPVLDKRDILDYLECTSNGKWYEPPVSFSGLAKSLRSAVHHSSPIYVKRNVL
ASTYIPHPLLSRQDFSRFALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVDDSVFWFVENFTQPHEFAPDTVFHL
LEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATDVESLRDAMRNSKGLGNFKNLFFY
SPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSMGDVEKVAKVFVRNELSPLQDRFREV
NDWLGMEVIRFKEYTLDNPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 5e-106 65
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 5e-106 65
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 1e-78 51