Gene Information

Name : SE451236_12910 (SE451236_12910)
Accession : YP_008265608.1
Strain : Salmonella enterica 08-1736
Genome accession: NC_021820
Putative virulence/resistance : Virulence
Product : type III secretion system lipoprotein SsaJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2736891 - 2737640 bp
Length : 750 bp
Strand : +
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAGGTTCATCGTATAGTATTTCTTACTGTCCTTACGTTCTTTCTTACGGCATGTGATGTGGATCTTTATCGCTCATT
GCCAGAAGATGAAGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGAAAAAAAACAGGAAGAGGATG
GTGTAACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTAACGGTTATCCGCATAGGCAG
TTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAACAGCAGAAGATTAATTTTTT
AAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGTGACCATTGCGCTACCGACTT
ATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTCAGGTCAATATGGAGGCCTTT
CGGGTAAAAATTAAAGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATTAGTATCTTGATGCAGCCTGC
TGAATTCAGAATGGTAGCTGACGTACCCGCGAGACAAACATTCTGGATTATGGACGTTATCAACGCCAATAAAGGGAAGG
TGGTGAAGTGGTTGATGAAATACCCTTATCCGTTGATGTTATCGTTGACAGGACTGTTATTAGGAGTGGGCATCCTGATC
GGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAF
RVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
GYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 2e-106 100
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 4e-86 100
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 1e-106 100
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 6e-105 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 2e-105 99
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 2e-105 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 3e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SE451236_12910 YP_008265608.1 type III secretion system lipoprotein SsaJ VFG0510 Protein 8e-107 100